RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PROKR1Q8TCW9 393 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 NR4A3Q92570 626 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 HSPH1Q92598 858 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 HDAC11Q96DB2 347 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 RMDN2Q96LZ7 410 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 NRTNQ99748 197 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 C17orf62Q9BQA9 187 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 XPO4Q9C0E2 1151 aaKnown RBP7.45□□□□□ -1.22
SMC3-202ENST00000462899 CHRNA10Q9GZZ6 450 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 OLAHQ9NV23 265 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 IMP3Q9NV31 184 aaKnown RBP7.45□□□□□ -1.22
SMC3-202ENST00000462899 SEPT11Q9NVA2 429 aaKnown RBP7.45□□□□□ -1.22
SMC3-202ENST00000462899 SHOC2Q9UQ13 582 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 CDYLQ9Y232 598 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 SPO11Q9Y5K1 396 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 ABCA4P78363 2273 aa7.45□□□□□ -1.22
SMC3-202ENST00000462899 SCN2AQ99250 2005 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 A0A1B0GTL3 188 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 CCDC66A2RUB6 948 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 BTN3A3O00478 584 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 BTN3A1O00481 513 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 PEX12O00623 359 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 SGTAO43765 313 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 ALOX12BO75342 701 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 ONECUT2O95948 504 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 CTSBP07858 339 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 HBQ1P09105 142 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 HLA-DPA1P20036 260 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 AGXTP21549 392 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 CDH3P22223 829 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 MMP11P24347 488 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 PRDX3P30048 256 aaKnown RBP7.44□□□□□ -1.22
SMC3-202ENST00000462899 HMGCLP35914 325 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 KIR3DL1P43629 444 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 IFI35P80217 286 aaPredicted RBP7.44□□□□□ -1.22
SMC3-202ENST00000462899 Q0VFX4 171 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 SLC10A2Q12908 348 aaPredicted RBP7.44□□□□□ -1.22
SMC3-202ENST00000462899 ZBTB17Q13105 803 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 DPYSL3Q14195 570 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 SYCP1Q15431 976 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 SLC14A2Q15849 920 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 ZIC1Q15915 447 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 INAQ16352 499 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 IFI16Q16666 785 aaKnown RBP7.44□□□□□ -1.22
SMC3-202ENST00000462899 ZNF658BQ4V348 819 aaPredicted RBP7.44□□□□□ -1.22
SMC3-202ENST00000462899 CCDC183Q5T5S1 534 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 PPP1R2P3Q6NXS1 205 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 TTC30BQ8N4P2 665 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 BRSK1Q8TDC3 778 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 PTERQ96BW5 349 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 FAF2Q96CS3 445 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 IMP4Q96G21 291 aaKnown RBP7.44□□□□□ -1.22
SMC3-202ENST00000462899 C12orf66Q96MD2 445 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 ERGIC2Q96RQ1 377 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 ADGRE3Q9BY15 652 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 WWP1Q9H0M0 922 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 TSPAN10Q9H1Z9 355 aaPredicted RBP7.44□□□□□ -1.22
SMC3-202ENST00000462899 FAM60AQ9NP50 221 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 IL26Q9NPH9 171 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 SMOXQ9NWM0 555 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 SERTAD3Q9UJW9 196 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 FBXL4Q9UKA2 621 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 TTLL3Q9Y4R7 772 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 HS3ST3B1Q9Y662 390 aa7.44□□□□□ -1.22
SMC3-202ENST00000462899 MGAT4DA6NG13 374 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 OR2AG2A6NM03 316 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 CD63P08962 238 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 GZMAP12544 262 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 PVRP15151 417 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 CD1EP15812 388 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 PBX1P40424 430 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 DCDP81605 110 aaKnown RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 GBE1Q04446 702 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 PPIDQ08752 370 aaKnown RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 MFAP5Q13361 173 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 XRCC4Q13426 336 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 GTF2H3Q13889 308 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 PRKD1Q15139 912 aaPredicted RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 CYP2A13Q16696 494 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 VWA2Q5GFL6 755 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 FAM182AQ5T1J6 154 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 AGAP7PQ5VUJ5 663 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 MLIPQ5VWP3 458 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 E4F1Q66K89 784 aaPredicted RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 MTFR2Q6P444 385 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 XKRXQ6PP77 449 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 TMEM220Q6QAJ8 160 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 KIRREL2Q6UWL6 708 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 COX15Q7KZN9 410 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 APTXQ7Z2E3 356 aaKnown RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 ANKMY2Q8IV38 441 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 ADGRF3Q8IZF5 1079 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 LILRA3Q8N6C8 439 aaPredicted RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 PQLC3Q8N755 202 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 BEND7Q8N7W2 519 aaPredicted RBP7.43□□□□□ -1.22
SMC3-202ENST00000462899 CATSPER1Q8NEC5 780 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 OR4E2Q8NGC2 313 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 OR2L2Q8NH16 312 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 FLVCR1-AS1Q8TAF5 88 aa7.43□□□□□ -1.22
SMC3-202ENST00000462899 ZNF653Q96CK0 615 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms