RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 EBLN1P0CF75 366 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 CDKN1CP49918 316 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 DMPKQ09013 629 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 TMEM115Q12893 351 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 ITGA9Q13797 1035 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 NADK2Q4G0N4 442 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 CCDC38Q502W7 563 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 C4orf17Q53FE4 359 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 PRR30Q53SZ7 412 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 IRGCQ6NXR0 463 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 FAM199XQ6PEV8 388 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 FAM83HQ6ZRV2 1179 aaPredicted RBP7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 TRAPPC5Q8IUR0 188 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 PIANPQ8IYJ0 282 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 CCDC89Q8N998 374 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 RASGEF1AQ8N9B8 481 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 Q8NA96 180 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 SLC38A9Q8NBW4 561 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 OR13J1Q8NGT2 312 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 CPT1CQ8TCG5 803 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 ZNF398Q8TD17 642 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 ACTRT1Q8TDG2 376 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 ADAMTS17Q8TE56 1095 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 STYXQ8WUJ0 223 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 CXorf40BQ96DE9 158 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 ZDHHC12Q96GR4 267 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 AP1M1Q9BXS5 423 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 FAM96AQ9H5X1 160 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 LRRC4CQ9HCJ2 640 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 EIF2B3Q9NR50 452 aaKnown RBP7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 SLC2A6Q9UGQ3 507 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 PADI1Q9ULC6 663 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 MAP4K5Q9Y4K4 846 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 CROCCQ5TZA2 2017 aa7.72□□□□□ -1.17
CDC42BPA-210ENST00000462553 PDZD2O15018 2839 aa7.71□□□□□ -1.17
CDC42BPA-210ENST00000462553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 CCDC78A2IDD5 438 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 TLCD2A6NGC4 264 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 OR51F1A6NGY5 319 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 PHF2O75151 1096 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 CEACAM4O75871 244 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 TMEM63AO94886 807 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 APRTP07741 180 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 CCNYL3P0C7X3 344 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 TPSB2P20231 275 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 IDSP22304 550 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 PTPN4P29074 926 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 MC4RP32245 332 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 FOXN2P32314 431 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 COILP38432 576 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 HADHAP40939 763 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 PTGIRP43119 386 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 MAGEA6P43360 314 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 PGDP52209 483 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 PDE1BQ01064 536 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 ACVR1Q04771 509 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 CDH17Q12864 832 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 GPS2Q13227 327 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 KCNJ11Q14654 390 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 TRIP13Q15645 432 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 TPSAB1Q15661 275 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 RPE65Q16518 533 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZNF658BQ4V348 819 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 BCL7AQ4VC05 210 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 LDLRAP1Q5SW96 308 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 TSTD2Q5T7W7 516 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 ANKRD22Q5VYY1 191 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 DUS1LQ6P1R4 473 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 SNX20Q7Z614 316 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 SYVN1Q86TM6 617 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 LINC00523Q86TU6 105 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 NXPE1Q8N323 547 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 C17orf53Q8N3J3 647 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 D2HGDHQ8N465 521 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 SIDT2Q8NBJ9 832 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 UBXN4Q92575 508 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 ANP32BQ92688 251 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 LRRC45Q96CN5 670 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZNF501Q96CX3 271 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 CDKN2AIPNLQ96HQ2 116 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZNF514Q96K75 400 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 PPM1MQ96MI6 270 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 ZNF778Q96MU6 729 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 FCRL4Q96PJ5 515 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 RANBP9Q96S59 729 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 MAP3K3Q99759 626 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 GPR87Q9BY21 358 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 ASB8Q9H765 288 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 PDE7BQ9NP56 450 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 FGF21Q9NSA1 209 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 HOMER3Q9NSC5 361 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 RARRES3Q9UL19 164 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 RIMKLBQ9ULI2 386 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 TCAF1Q9Y4C2 921 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 PCDHGA9Q9Y5G4 932 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 POLQO75417 2590 aa7.71□□□□□ -1.18
CDC42BPA-210ENST00000462553 CCDC162PA2VCL2 907 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 OR5K3A6NET4 321 aa7.7□□□□□ -1.18
CDC42BPA-210ENST00000462553 ARGFXA6NJG6 315 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms