RNA–Protein interactions for RNA: ENST00000461778.5

NR1H3-215, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 5

Gene NR1H3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-215	ENST00000461778	TRIM39	Q9HCM9	518 aa		12.81	□□□□□ -0.36
NR1H3-215	ENST00000461778	TMEM45A	Q9NWC5	275 aa		12.81	□□□□□ -0.36
NR1H3-215	ENST00000461778	OPTC	Q9UBM4	332 aa		12.81	□□□□□ -0.36
NR1H3-215	ENST00000461778	POLG2	Q9UHN1	485 aa		12.81	□□□□□ -0.36
NR1H3-215	ENST00000461778	CA14	Q9ULX7	337 aa		12.81	□□□□□ -0.36
NR1H3-215	ENST00000461778	TIMM22	Q9Y584	194 aa		12.81	□□□□□ -0.36
NR1H3-215	ENST00000461778	DOCK9	Q9BZ29	2069 aa		12.81	□□□□□ -0.36
NR1H3-215	ENST00000461778	C17orf113	A0A1B0GUU1	675 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	GIPC1	O14908	333 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	VEGFD	O43915	354 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	RNASEH1	O60930	286 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	PEX11A	O75192	247 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	WDR47	O94967	919 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	CHEK2	O96017	543 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	LINC00032	P0C843	101 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	EBLN1	P0CF75	366 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	EZR	P15311	586 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	CYP2A7	P20853	494 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	TEAD1	P28347	426 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	GPR1	P46091	355 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	SLC6A12	P48065	614 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	SOX9	P48436	509 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	CCR3	P51677	355 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	STARD6	P59095	220 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	CUL3	Q13618	768 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	GRB7	Q14451	532 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	GSTA3	Q16772	222 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	ZXDC	Q2QGD7	858 aa	Predicted RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	SLC44A4	Q53GD3	710 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	AGBL4	Q5VU57	503 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	ADAMTSL4	Q6UY14	1074 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778		Q6ZSR9	355 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	MILR1	Q7Z6M3	343 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	FUNDC1	Q8IVP5	155 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	AADAT	Q8N5Z0	425 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	BEND7	Q8N7W2	519 aa	Predicted RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	ZNF513	Q8N8E2	541 aa	Predicted RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	KY	Q8NBH2	561 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	OR4F6	Q8NGB9	312 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	OR2T3	Q8NH03	318 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	MCOLN3	Q8TDD5	553 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	ATOH1	Q92858	354 aa	Predicted RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	FBXL8	Q96CD0	374 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	MARK4	Q96L34	752 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	EFCAB1	Q9HAE3	211 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	FBRS	Q9HAH7	460 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	WWOX	Q9NZC7	414 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	TRPS1	Q9UHF7	1281 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	TSR3	Q9UJK0	312 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	PRPF19	Q9UMS4	504 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	GPR34	Q9UPC5	381 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	CACNA1H	O95180	2353 aa		12.8	□□□□□ -0.36
NR1H3-215	ENST00000461778	PIEZO1	Q92508	2521 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	ATP6AP2	A0A1C7CYW4	349 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	TMEM202	A6NGA9	273 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	OR2AG2	A6NM03	316 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	MEI4	A8MW99	385 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778		K7ESM1	405 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	INPP4B	O15327	924 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	MID1	O15344	667 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	CRCP	O75575	148 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	ATP6AP2	O75787	350 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	LMNA	P02545	664 aa	Known RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	CAPN1	P07384	714 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	EPB42	P16452	691 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	EPOR	P19235	508 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	HIST1H2AD	P20671	130 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	NTSR1	P30989	418 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	GDF5	P43026	501 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	CCNG1	P51959	295 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	RPS14	P62263	151 aa	Known RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	PCDH1	Q08174	1060 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	STX5	Q13190	355 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	BOP1	Q14137	746 aa	Known RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	FASTK	Q14296	549 aa	Known RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	SMU1	Q2TAY7	513 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	TRMT5	Q32P41	509 aa	Known RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	AGK	Q53H12	422 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	ZNF776	Q68DI1	518 aa	Predicted RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	XKR5	Q6UX68	686 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	C16orf89	Q6UX73	402 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	LRRC70	Q7Z2Q7	622 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	DDIAS	Q8IXT1	998 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	CHPF	Q8IZ52	775 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	SLC22A15	Q8IZD6	547 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	DSEL	Q8IZU8	1212 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	ENDOV	Q8N8Q3	282 aa	Known RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	CDYL2	Q8N8U2	506 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	FBXO15	Q8NCQ5	510 aa	Predicted RBP	12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	METTL6	Q8TCB7	284 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	TSPEAR	Q8WU66	669 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	WDR60	Q8WVS4	1066 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	TUBGCP3	Q96CW5	907 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	HIST1H2AH	Q96KK5	128 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	HIST1H2AJ	Q99878	128 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	H2AFJ	Q9BTM1	129 aa		12.79	□□□□□ -0.36
NR1H3-215	ENST00000461778	SLC29A3	Q9BZD2	475 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms