RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 TTC1Q99614 292 aa17.16■□□□□ 0.34
COL1A2-202ENST00000461525 NRTNQ99748 197 aa17.16■□□□□ 0.34
COL1A2-202ENST00000461525 CHST8Q9H2A9 424 aa17.16■□□□□ 0.34
COL1A2-202ENST00000461525 ETNK1Q9HBU6 452 aa17.16■□□□□ 0.34
COL1A2-202ENST00000461525 ACTR10Q9NZ32 417 aa17.16■□□□□ 0.34
COL1A2-202ENST00000461525 GUCA1BQ9UMX6 200 aa17.16■□□□□ 0.34
COL1A2-202ENST00000461525 ZNF148Q9UQR1 794 aa17.16■□□□□ 0.34
COL1A2-202ENST00000461525 FARSAQ9Y285 508 aaKnown RBP17.16■□□□□ 0.34
COL1A2-202ENST00000461525 ASF1AQ9Y294 204 aa17.16■□□□□ 0.34
COL1A2-202ENST00000461525 MEN1O00255 615 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 ARHGAP6O43182 974 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 SUN1O94901 812 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 OR56A5P0C7T3 313 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 MSL3P1P0C860 447 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 PVRP15151 417 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 NR1D1P20393 614 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 CYP2A7P20853 494 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 KLRB1Q12918 225 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 BRD3Q15059 726 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 LYPLAL1Q5VWZ2 237 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 IZUMO3Q5VZ72 239 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 ZNF517Q6ZMY9 492 aaPredicted RBP17.15■□□□□ 0.34
COL1A2-202ENST00000461525 HOOK3Q86VS8 718 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 SLC13A5Q86YT5 568 aaPredicted RBP17.15■□□□□ 0.34
COL1A2-202ENST00000461525 APLFQ8IW19 511 aaPredicted RBP17.15■□□□□ 0.34
COL1A2-202ENST00000461525 ADGRF3Q8IZF5 1079 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 OR5AR1Q8NGP9 310 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 OR13J1Q8NGT2 312 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 OR1L3Q8NH93 324 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 UBE2Q2Q8WVN8 375 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 C1orf54Q8WWF1 131 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 HDAC10Q969S8 669 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 CLIP3Q96DZ5 547 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 TRAPPC9Q96Q05 1148 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 KLHL25Q9H0H3 589 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 RAB6BQ9NRW1 208 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 TLK1Q9UKI8 766 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 ICKQ9UPZ9 632 aa17.15■□□□□ 0.34
COL1A2-202ENST00000461525 F8W8V4 182 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 KRT86O43790 486 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 GOT2P00505 430 aaKnown RBP17.14■□□□□ 0.33
COL1A2-202ENST00000461525 SHMT2P34897 504 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 PLOD1Q02809 727 aaPredicted RBP17.14■□□□□ 0.33
COL1A2-202ENST00000461525 SEMA5AQ13591 1074 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 IL10RAQ13651 578 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 ZNF789Q5FWF6 425 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 PLEKHS1Q5SXH7 462 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 TSTD2Q5T7W7 516 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 SPESP1Q6UW49 350 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 DSELQ8IZU8 1212 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 CCDC89Q8N998 374 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 TEX19Q8NA77 164 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 RANBP9Q96S59 729 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 SLC7A5P2Q9GIP4 190 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 ACTR5Q9H9F9 607 aaPredicted RBP17.14■□□□□ 0.33
COL1A2-202ENST00000461525 SLC2A6Q9UGQ3 507 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 SERTAD3Q9UJW9 196 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 RIMKLBQ9ULI2 386 aa17.14■□□□□ 0.33
COL1A2-202ENST00000461525 SLC5A10A0PJK1 596 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 K7EM74 188 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 DNAJB5O75953 348 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 RAB40ALP0C0E4 278 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 ADRA1DP25100 572 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 ACADLP28330 430 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 RORAP35398 523 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 GRIA1P42261 906 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 ITGA1P56199 1179 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 FOXK1P85037 733 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 SNX1Q13596 522 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 COLEC12Q5KU26 742 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 NAPRTQ6XQN6 538 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 TRIM73Q86UV7 250 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 TBC1D21Q8IYX1 336 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 ENDOVQ8N8Q3 282 aaKnown RBP17.13■□□□□ 0.33
COL1A2-202ENST00000461525 OR6P1Q8NGX9 317 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 TRIM55Q9BYV6 548 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 PCMTD2Q9NV79 361 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 PAK5Q9P286 719 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 POLG2Q9UHN1 485 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
COL1A2-202ENST00000461525 TDRKHQ9Y2W6 561 aaKnown RBP17.13■□□□□ 0.33
COL1A2-202ENST00000461525 E7EQ34 232 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 KDM1AO60341 852 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 OR1I1O60431 355 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 APRTP07741 180 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 UGT2B7P16662 529 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 PRAMEP78395 509 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 ACVR1Q04771 509 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 RPS6KA1Q15418 735 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 CPZQ66K79 652 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 LCN10Q6JVE6 187 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 UNC5AQ6ZN44 842 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 NLRP9Q7RTR0 991 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 SYTL1Q8IYJ3 562 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 C19orf47Q8N9M1 422 aaKnown RBP17.12■□□□□ 0.33
COL1A2-202ENST00000461525 OR4L1Q8NH43 312 aa17.12■□□□□ 0.33
COL1A2-202ENST00000461525 OR5K2Q8NHB8 316 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms