RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 C2orf49Q9BVC5 232 aaPredicted RBP14.19□□□□□ -0.14
NCL-207ENST00000461347 MAGEE1Q9HCI5 957 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 MIEF1Q9NQG6 463 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 GTF2IRD1Q9UHL9 959 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 PCDHB8Q9UN66 801 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 A0A1W2PQ67 120 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 FPGTO14772 594 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 IDH3BO43837 385 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 ALDH3B2P48448 385 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 TIMM50Q3ZCQ8 353 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 XKR6Q5GH73 641 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 UBXN11Q5T124 520 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 TMEM236Q5W0B7 351 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 CERS6Q6ZMG9 384 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 SLC22A16Q86VW1 577 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 UMODL1-AS1Q8N2C9 162 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 GLB1L3Q8NCI6 653 aaPredicted RBP14.19□□□□□ -0.14
NCL-207ENST00000461347 OR13J1Q8NGT2 312 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 HDAC2Q92769 488 aaKnown RBP14.19□□□□□ -0.14
NCL-207ENST00000461347 NT5C3BQ969T7 300 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 MYO19Q96H55 970 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 MAELQ96JY0 434 aaKnown RBP14.19□□□□□ -0.14
NCL-207ENST00000461347 COPS4Q9BT78 406 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 MAP10Q9P2G4 905 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 FCF1Q9Y324 198 aaKnown RBP14.19□□□□□ -0.14
NCL-207ENST00000461347 TESMINQ9Y4I5 508 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 TBKBP1A7MCY6 615 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 UBFD1O14562 309 aaKnown RBP14.19□□□□□ -0.14
NCL-207ENST00000461347 CCNKO75909 580 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 SBK3P0C264 359 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 ALDH9A1P49189 494 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 EMX2Q04743 252 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 TYW3Q6IPR3 259 aaKnown RBP14.19□□□□□ -0.14
NCL-207ENST00000461347 DENND5AQ6IQ26 1287 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 KDELC1Q6UW63 502 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 ENPP6Q6UWR7 440 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 LRRTM3Q86VH5 581 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 BBS7Q8IWZ6 715 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 COLGALT2Q8IYK4 626 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 TMEM159Q96B96 161 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 GPR78Q96P69 363 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 TNFRSF12AQ9NP84 129 aa14.19□□□□□ -0.14
NCL-207ENST00000461347 STX16O14662 325 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 EEDO75530 441 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 ITGBL1O95965 494 aaPredicted RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 IGSF6O95976 241 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 RPLP2P05387 115 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 IGFBP6P24592 240 aaPredicted RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 SERPINA4P29622 427 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 ELAVL2Q12926 359 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 MTA1Q13330 715 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 SERINC3Q13530 473 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 C1DQ13901 141 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 HIST2H2ACQ16777 129 aaPredicted RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 OTUD1Q5VV17 481 aaPredicted RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 HIST2H2AA3Q6FI13 130 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 RNF180Q86T96 592 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 ZBTB2Q8N680 514 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 TRUB1Q8WWH5 349 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 MOSPD1Q9UJG1 213 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 FOCADQ5VW36 1801 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 CYP7B1O75881 506 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 MATN4O95460 622 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 IFNA14P01570 189 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 ALPIP09923 528 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 POU2F1P14859 743 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 CTSKP43235 329 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 MAP2K4P45985 399 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 CASP9P55211 416 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 ZC3H12BQ5HYM0 836 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 KANK2Q63ZY3 851 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 PDE12Q6L8Q7 609 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 CES5AQ6NT32 575 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 PELI3Q8N2H9 469 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 GOLM1Q8NBJ4 401 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 ABHD11Q8NFV4 315 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 ZNF347Q96SE7 839 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 SMAD5Q99717 465 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 TUBA1CQ9BQE3 449 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 TMEM248Q9NWD8 314 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 AZGP1P25311 298 aaKnown RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 ARNTP27540 789 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 CD47Q08722 323 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 PHKG1Q16816 387 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 C6orf183Q5T699 404 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.18□□□□□ -0.14
NCL-207ENST00000461347 BRI3BPQ8WY22 251 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 HERC2P3Q9BVR0 1158 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 DCSTAMPQ9H295 470 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 FAM118AQ9NWS6 357 aa14.18□□□□□ -0.14
NCL-207ENST00000461347 LOC110117498-PIK3R3F6TDL0 507 aa14.17□□□□□ -0.14
NCL-207ENST00000461347 PER2O15055 1255 aa14.17□□□□□ -0.14
NCL-207ENST00000461347 INMTO95050 263 aa14.17□□□□□ -0.14
NCL-207ENST00000461347 FGF4P08620 206 aa14.17□□□□□ -0.14
NCL-207ENST00000461347 GSTM1P09488 218 aa14.17□□□□□ -0.14
NCL-207ENST00000461347 OPRL1P41146 370 aa14.17□□□□□ -0.14
NCL-207ENST00000461347 TUFMP49411 452 aaKnown RBP14.17□□□□□ -0.14
NCL-207ENST00000461347 NUDT6P53370 316 aa14.17□□□□□ -0.14
NCL-207ENST00000461347 PLA2G16P53816 162 aa14.17□□□□□ -0.14
NCL-207ENST00000461347 CDC42P60953 191 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms