RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CCDC68Q9H2F9 335 aa12.92□□□□□ -0.34
RAB11FIP3-207ENST00000461009 SLC40A1Q9NP59 571 aa12.92□□□□□ -0.34
RAB11FIP3-207ENST00000461009 FBXO8Q9NRD0 319 aa12.92□□□□□ -0.34
RAB11FIP3-207ENST00000461009 TMEM9Q9P0T7 183 aa12.92□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-207ENST00000461009 KLHL3Q9UH77 587 aa12.92□□□□□ -0.34
RAB11FIP3-207ENST00000461009 WDR37Q9Y2I8 494 aa12.92□□□□□ -0.34
RAB11FIP3-207ENST00000461009 POLR1CO15160 346 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CAPN5O15484 640 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ESR1P03372 595 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 APOA4P06727 396 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 MAP4P27816 1152 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 FMO4P31512 558 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 EIF3BP55884 814 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 MC2RQ01718 297 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CBLBQ13191 982 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CRYMQ14894 314 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 HSP90AA5PQ58FG0 334 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 HP1BP3Q5SSJ5 553 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ZNF470Q6ECI4 717 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CAPRIN2Q6IMN6 1127 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 KLHL35Q6PF15 583 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ARHGAP22Q7Z5H3 698 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 VASH2Q86V25 355 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 KCNMB4Q86W47 210 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ZNF843Q8N446 348 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ZDHHC12Q96GR4 267 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 INSM2Q96T92 566 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 LRRC1Q9BTT6 524 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 TBC1D10AQ9BXI6 508 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 P2RY12Q9H244 342 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 TRIT1Q9H3H1 467 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PPANQ9NQ55 473 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 IARS2Q9NSE4 1012 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 IMP3Q9NV31 184 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 OCIAD1Q9NX40 245 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 FBXO5Q9UKT4 447 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 B3GALT1Q9Y5Z6 326 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 TEX264Q9Y6I9 313 aa12.91□□□□□ -0.34
RAB11FIP3-207ENST00000461009 SLC5A10A0PJK1 596 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 E7ESA3 106 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 TOX3O15405 576 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 BANF1O75531 89 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 RASSF9O75901 435 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 S1PR4O95977 384 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ITGB6P18564 788 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PLTPP55058 493 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 SLC7A5Q01650 507 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CTBP1Q13363 440 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 BOP1Q14137 746 aaKnown RBP12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 LY6DQ14210 128 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 BRD3Q15059 726 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ZNF658BQ4V348 819 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 ANKS6Q68DC2 871 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 OTOAQ7RTW8 1153 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 IGDCC3Q8IVU1 814 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PALM2Q8IXS6 379 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 NLGN4XQ8N0W4 816 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 LILRA3Q8N6C8 439 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 FBXO36Q8NEA4 188 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 NLGN4YQ8NFZ3 816 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PYROXD1Q8WU10 500 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 JPH3Q8WXH2 748 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 LPGAT1Q92604 370 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 TFGQ92734 400 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 NKD1Q969G9 470 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CFAP36Q96G28 342 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PWWP2AQ96N64 755 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 FERD3LQ96RJ6 166 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 OR52A5Q9H2C5 316 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 MVB12BQ9H7P6 319 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 IL1RAPL1Q9NZN1 696 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CHMP2BQ9UQN3 213 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CRYL1Q9Y2S2 319 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 PCDHGA4Q9Y5G9 962 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 CFAP20Q9Y6A4 193 aaKnown RBP12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 COMMD10Q9Y6G5 202 aa12.9□□□□□ -0.34
RAB11FIP3-207ENST00000461009 LOC400499M0QZD8 3231 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 E5RI56 91 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 TP73O15350 636 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 KDM1AO60341 852 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 RAD1O60671 282 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 C1QL1O75973 258 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 ANKRD34CP0C6C1 535 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 ERVK-10P10266 1014 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 PKMP14618 531 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 TYRP1P17643 537 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 CHRM3P20309 590 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 AOAHP28039 575 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 PDHA2P29803 388 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 CCR7P32248 378 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 PREPP48147 710 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 GUCY2DQ02846 1103 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 FOXM1Q08050 763 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 HSPA14Q0VDF9 509 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 GPR18Q14330 331 aa12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 FRG1Q14331 258 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP3-207ENST00000461009 PLCL1Q15111 1095 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms