RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-229	ENST00000460826	HOXB3	P14651	431 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	SAT1	P21673	171 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	CD9	P21926	228 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	NDUFS1	P28331	727 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	ATP5D	P30049	168 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	BDKRB1	P46663	353 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	PMS2	P54278	862 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	TUBB4B	P68371	445 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	GPLD1	P80108	840 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	NAB1	Q13506	487 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	GRB7	Q14451	532 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	KRT33B	Q14525	404 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	ZNF460	Q14592	562 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	PLCL1	Q15111	1095 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	TTLL9	Q3SXZ7	439 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	CCSMST1	Q4G0I0	132 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	TMEM207	Q6UWW9	146 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	UNC5D	Q6UXZ4	953 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	CYHR1	Q6ZMK1	362 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	RBM44	Q6ZP01	1051 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	TMPRSS12	Q86WS5	348 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	CEP97	Q8IW35	865 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	TBC1D21	Q8IYX1	336 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	DCBLD1	Q8N8Z6	715 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	OR52E1	Q8NGJ3	308 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	OR10G6	Q8NH81	332 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	OR5K2	Q8NHB8	316 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	WDR48	Q8TAF3	677 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	SKA2	Q8WVK7	121 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	ZFPM2	Q8WW38	1151 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	CYTH2	Q99418	400 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	TRIT1	Q9H3H1	467 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	XKR8	Q9H6D3	395 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	CAB39L	Q9H9S4	337 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	PLAGL1	Q9UM63	463 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	TDRKH	Q9Y2W6	561 aa	Known RBP	13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	COLEC10	Q9Y6Z7	277 aa		13.62	□□□□□ -0.23
HDLBP-229	ENST00000460826	RIPK2	O43353	540 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	DUX1	O43812	170 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	CS	O75390	466 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	TCEA3	O75764	348 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	UBXN7	O94888	489 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	MATN4	O95460	622 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	CPNE6	O95741	557 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	TSPAN12	O95859	305 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	MPC1L	P0DKB6	136 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	MPST	P25325	297 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	PPM1F	P49593	454 aa	Predicted RBP	13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	LIMK2	P53671	638 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	GFER	P55789	205 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	PPP1CA	P62136	330 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	SQSTM1	Q13501	440 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	MAP9	Q49MG5	647 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	GRTP1	Q5TC63	336 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	UGT3A1	Q6NUS8	523 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	RASGRP3	Q8IV61	690 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	SLITRK4	Q8IW52	837 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	LMNTD1	Q8N9Z9	388 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	OR4E2	Q8NGC2	313 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	EEF1AKMT1	Q8WVE0	214 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	NCSTN	Q92542	709 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	AHCYL2	Q96HN2	611 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	GPR22	Q99680	433 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	SCNM1	Q9BWG6	230 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	SEMA6C	Q9H3T2	930 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	TXNDC16	Q9P2K2	825 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	SLC39A10	Q9ULF5	831 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	ICK	Q9UPZ9	632 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	CLCA2	Q9UQC9	943 aa		13.61	□□□□□ -0.23
HDLBP-229	ENST00000460826	ADAMTS20	P59510	1910 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826		A0A087WUV0	522 aa	Predicted RBP	13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	HMX2	A2RU54	273 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	OR6C74	A6NCV1	312 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	ARHGEF33	A8MVX0	844 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	BTN3A3	O00478	584 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	ZW10	O43264	779 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	C1orf105	O95561	183 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	ABHD2	P08910	425 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	ENO3	P13929	434 aa	Predicted RBP	13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	JUP	P14923	745 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	AMD1	P17707	334 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	SPR	P35270	261 aa	Predicted RBP	13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	SKIV2L2	P42285	1042 aa	Known RBP	13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	CAPZB	P47756	277 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	PDAP1	Q13442	181 aa	Known RBP	13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	BMPR2	Q13873	1038 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	UAP1	Q16222	522 aa	Predicted RBP	13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	ISX	Q2M1V0	245 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	WDR93	Q6P2C0	686 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	NEK10	Q6ZWH5	1172 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	ERMP1	Q7Z2K6	904 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	GALNT15	Q8N3T1	639 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	LCN9	Q8WX39	176 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	LINGO1	Q96FE5	620 aa		13.6	□□□□□ -0.23
HDLBP-229	ENST00000460826	IL17F	Q96PD4	163 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms