RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 HTRA2O43464 458 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 CST1P01037 141 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 IL12AP29459 219 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 SETMARQ53H47 684 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 FAM180BQ6P0A1 224 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 CCDC81Q6ZN84 652 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 GRASPQ7Z6J2 395 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 SLC39A11Q8N1S5 342 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 ACDQ96AP0 544 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 EGLN2Q96KS0 407 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 PPP3R2Q96LZ3 170 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 MYOCQ99972 504 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 C9orf16Q9BUW7 83 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 ADI1Q9BV57 179 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 RIOK2Q9BVS4 552 aaKnown RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 OSBPL11Q9BXB4 747 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 TMEM181Q9P2C4 612 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 HEMK1Q9Y5R4 338 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 GPR45Q9Y5Y3 372 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 MIA3Q5JRA6 1907 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 K7EPI3 171 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 HNRNPRO43390 633 aaKnown RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 SNAP29O95721 258 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 CD160O95971 181 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 RPS17P08708 135 aaKnown RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 SRCP12931 536 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 ACADVLP49748 655 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 INHBCP55103 352 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 ARHGAP15Q53QZ3 475 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 INO80DQ53TQ3 878 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 GPRC6AQ5T6X5 926 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 CNKSR3Q6P9H4 555 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 UGT2A3Q6UWM9 527 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 SLC13A3Q8WWT9 602 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 CGREF1Q99674 301 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 BDH2Q9BUT1 245 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 YIPF2Q9BWQ6 316 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 DGCR6LQ9BY27 220 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 FAM192AQ9GZU8 254 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 FAM83DQ9H4H8 585 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 MAGEE1Q9HCI5 957 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 HPS4Q9NQG7 708 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 DGKBQ9Y6T7 804 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 CNTRLQ7Z7A1 2325 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 PRSS51A0A1B0GVH4 220 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 HIDE1A8MVS5 230 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 TTC34A8MYJ7 566 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 EVPLLA8MZ36 301 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 CLDN9O95484 217 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 HNRNPCP07910 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 MTHFRP42898 656 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 XIAPP98170 497 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 LRRC74AQ0VAA2 488 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 ZCCHC8Q6NZY4 707 aaKnown RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 C22orf39Q6P5X5 142 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 KIAA2013Q8IYS2 634 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 PROKR1Q8TCW9 393 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 IGFLR1Q9H665 355 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 POLR1BQ9H9Y6 1135 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 COMMD8Q9NX08 183 aa11.73□□□□□ -0.53
SMPD4-213ENST00000454468 MRPS23Q9Y3D9 190 aaKnown RBP11.73□□□□□ -0.53
SMPD4-213ENST00000454468 NUMA1Q14980 2115 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 FGF4P08620 206 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 CLTBP09497 229 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 PABPC1P11940 636 aaKnown RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 NSG1P42857 185 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 CLCN7P51798 805 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 GPR107Q5VW38 600 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 GPR141Q7Z602 305 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ZSWIM9Q86XI8 627 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ZDHHC13Q8IUH4 622 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 PANX1Q96RD7 426 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ZNF385DQ9H6B1 395 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 SMURF2Q9HAU4 748 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ELOVL2Q9NXB9 296 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 INTS6Q9UL03 887 aaKnown RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 BLOC1S6Q9UL45 172 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ORC6Q9Y5N6 252 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 CFAP20Q9Y6A4 193 aaKnown RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 FAM234BA2RU67 622 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 TLL1O43897 1013 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 DEAF1O75398 565 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 LEFTY1O75610 366 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 COX7A2P14406 83 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 ACRV1P26436 265 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 MEF2AQ02078 507 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 BNIP2Q12982 314 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 RAB33AQ14088 237 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 OR4F3Q6IEY1 312 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 TMEM199Q8N511 208 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 LILRA3Q8N6C8 439 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 TMEM102Q8N9M5 508 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 TOP1MTQ969P6 601 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 RPF2Q9H7B2 306 aaKnown RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 DNAAF2Q9NVR5 837 aaKnown RBP11.72□□□□□ -0.53
SMPD4-213ENST00000454468 KCTD5Q9NXV2 234 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 VAPAQ9P0L0 249 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 RALGAPA2Q2PPJ7 1873 aa11.72□□□□□ -0.53
SMPD4-213ENST00000454468 IFRD1O00458 451 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms