RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 FAM153AQ9UHL3 310 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FBXL4Q9UKA2 621 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 G3BP2Q9UN86 482 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NOVA2Q9UNW9 492 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OSGIN2Q9Y236 505 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC5A6Q9Y289 635 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PKP3Q9Y446 797 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CACNA1CQ13936 2221 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LOC285095A0A1B0GVY8 99 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR51F1A6NGY5 319 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 E7EQ34 232 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FFAR3O14843 346 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 STX7O15400 261 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GPR42O15529 346 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZSCAN9O15535 394 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LRRTM2O43300 516 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPOPO43791 374 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR2B3O76000 313 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SRP72O76094 671 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MBD3O95983 291 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RAB40ALP0C0E4 278 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 H2AFZP0C0S5 128 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 COMTP21964 271 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ITGA3P26006 1051 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GRNP28799 593 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PEBP1P30086 187 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GLRBP48167 497 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 UBASH3AP57075 661 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KCNK10P57789 538 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 XIAPP98170 497 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ITGA9Q13797 1035 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BOP1Q14137 746 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MYBPC3Q14896 1274 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC14A2Q15849 920 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC18A3Q16572 532 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CYP2A13Q16696 494 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF658BQ4V348 819 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BCL7AQ4VC05 210 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LYPLAL1Q5VWZ2 237 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPESP1Q6UW49 350 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 H2AFVQ71UI9 128 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FJX1Q86VR8 437 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PIANPQ8IYJ0 282 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PRSS58Q8IYP2 241 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ADGRF3Q8IZF5 1079 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NXPE1Q8N323 547 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TMEM102Q8N9M5 508 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GLIS1Q8NBF1 620 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CLEC1AQ8NC01 280 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ACVR1CQ8NER5 493 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR2L2Q8NH16 312 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF398Q8TD17 642 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GRHL3Q8TE85 626 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SEC14L1Q92503 715 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KRT35Q92764 455 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SYN2Q92777 582 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 N4BP2L2Q92802 583 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LRFN5Q96NI6 719 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IL17FQ96PD4 163 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GBP5Q96PP8 586 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TRAPPC9Q96Q05 1148 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FERD3LQ96RJ6 166 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 HEMGNQ9BXL5 484 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MAK16Q9BXY0 300 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GBA3Q9H227 469 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR52A5Q9H2C5 316 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SOX17Q9H6I2 414 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF552Q9H707 407 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ASB8Q9H765 288 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC6A20Q9NP91 592 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC22A11Q9NSA0 550 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 STOX2Q9P2F5 926 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IFT80Q9P2H3 777 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SH3BGRL2Q9UJC5 107 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TSR3Q9UJK0 312 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CAPN11Q9UMQ6 739 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RUVBL2Q9Y230 463 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PADI2Q9Y2J8 665 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TDRKHQ9Y2W6 561 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LUC7L2Q9Y383 392 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PCDHGB7Q9Y5F8 929 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BZW2Q9Y6E2 419 aaKnown RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PRSS21Q9Y6M0 314 aa5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF469Q96JG9 3925 aaPredicted RBP5.79□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NAV3Q8IVL0 2385 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 hCG_1818297A0A087WSY0 165 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SMTNL1A8MU46 457 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PRSS44E7EML9 344 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 H3BMH7 237 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 AKR1B10O60218 316 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 WISP2O76076 250 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MED26O95402 600 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DDAH2O95865 285 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RECKO95980 971 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ALPPP05187 535 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CELA2AP08217 269 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TMEM253P0C7T8 217 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TPBGLP0DKB5 382 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ITGALP20701 1170 aa5.78□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MAGP20916 626 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms