RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CD200R1Q8TD46 325 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 INPP5DQ92835 1189 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 HGH1Q9BTY7 390 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 STRADBQ9C0K7 418 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 EPHA6Q9UF33 1036 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 NFU1Q9UMS0 254 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 C9P02748 559 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 MPSTP25325 297 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 CDKN2DP55273 166 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 TRA2AQ13595 282 aaKnown RBP eCLIP27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 KYNUQ16719 465 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 TTLL9Q3SXZ7 439 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 PHF19Q5T6S3 580 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 UGT3A1Q6NUS8 523 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 KLHL35Q6PF15 583 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 OR4E2Q8NGC2 313 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 FBF1Q8TES7 1133 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 LCN9Q8WX39 176 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 CCDC74BQ96LY2 380 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 TAS2R13Q9NYV9 303 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 NINJ2Q9NZG7 142 aa27.21■■□□□ 1.95
SMARCC1-203ENST00000454240 CCDC187A0A096LP49 1063 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 A0A1W2PNU3 283 aaPredicted RBP27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 CAPN5O15484 640 aaPredicted RBP27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 MATN4O95460 622 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 TPBGLP0DKB5 382 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 STX2P32856 288 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 SKIV2L2P42285 1042 aaKnown RBP27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 GFERP55789 205 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 RTP5Q14D33 572 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 KLHL38Q2WGJ6 581 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 TEX35Q5T0J7 233 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 HECTD2Q5U5R9 776 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 NEK10Q6ZWH5 1172 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 SPNS2Q8IVW8 549 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 CFAP61Q8NHU2 1237 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 ZMYND15Q9H091 742 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 VWA7Q9Y334 891 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 NFS1Q9Y697 457 aa27.2■■□□□ 1.94
SMARCC1-203ENST00000454240 OR5K3A6NET4 321 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 RPN2P04844 631 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 CBSLP0DN79 551 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 CBSP35520 551 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 KBTBD12Q3ZCT8 623 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 FAM45BPQ6NSW5 357 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 GPATCH11Q8N954 259 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 FAM45AQ8TCE6 357 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 SKA2Q8WVK7 121 aaPredicted RBP27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 NRTNQ99748 197 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 CDC42EP4Q9H3Q1 356 aaKnown RBP27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 SRMSQ9H3Y6 488 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 RHOJQ9H4E5 214 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 HRASLS2Q9NWW9 162 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 TRMT6Q9UJA5 497 aaKnown RBP27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 ASPMQ8IZT6 3477 aa27.19■■□□□ 1.94
SMARCC1-203ENST00000454240 OR6C74A6NCV1 312 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 EIF3FO00303 357 aaPredicted RBP27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 C1orf105O95561 183 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 ENO3P13929 434 aaPredicted RBP27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 ILF2Q12905 390 aaKnown RBP27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 EIF3IQ13347 325 aaKnown RBP27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 C16orf72Q14CZ0 275 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 CYHR1Q6ZMK1 362 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 ARHGAP22Q7Z5H3 698 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 AMIGO1Q86WK6 493 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 OOSP2Q86WS3 158 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 DCUN1D3Q8IWE4 304 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 RCBTB1Q8NDN9 531 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 WDR36Q8NI36 951 aaKnown RBP27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 ZDHHC12Q96GR4 267 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 FOPNLQ96NB1 174 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 CPNE1Q99829 537 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 SATB2Q9UPW6 733 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 ICKQ9UPZ9 632 aa27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 RUVBL2Q9Y230 463 aaKnown RBP27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 TDRKHQ9Y2W6 561 aaKnown RBP27.18■■□□□ 1.94
SMARCC1-203ENST00000454240 HGSO14964 777 aaPredicted RBP27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 MPC1LP0DKB6 136 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 FDXRP22570 491 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 LSSP48449 732 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 GRB7Q14451 532 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 RAB11FIP2Q7L804 512 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 CPNE9Q8IYJ1 553 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 EIF1ADQ8N9N8 165 aaKnown RBP27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 PRR11Q96HE9 360 aaPredicted RBP27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 TGM7Q96PF1 710 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 OLFM1Q99784 485 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 XKR8Q9H6D3 395 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 POLR1BQ9H9Y6 1135 aa27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 TSR3Q9UJK0 312 aaKnown RBP27.17■■□□□ 1.94
SMARCC1-203ENST00000454240 MCM3P25205 808 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 SHMT2P34897 504 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 PPP1CAP62136 330 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 C3orf38Q5JPI3 329 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 SNAP47Q5SQN1 464 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 UBAP2Q5T6F2 1119 aaKnown RBP27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 PAQR3Q6TCH7 311 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 CTAGE3PQ8IX95 158 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 NXPE2Q96DL1 559 aa27.16■■□□□ 1.94
SMARCC1-203ENST00000454240 VPS39Q96JC1 886 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms