RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 PHC3Q8NDX5 983 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 CCDC110Q8TBZ0 833 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 ACTL9Q8TC94 416 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 N4BP2L2Q92802 583 aaPredicted RBP11.32□□□□□ -0.6
GARNL3-210ENST00000453030 DNAJC1Q96KC8 554 aaKnown RBP11.32□□□□□ -0.6
GARNL3-210ENST00000453030 TRAPPC9Q96Q05 1148 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 TBL1YQ9BQ87 522 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 FERMT1Q9BQL6 677 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 PITPNM3Q9BZ71 974 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 SLC29A3Q9BZD2 475 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 OR52A5Q9H2C5 316 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 VPS37BQ9H9H4 285 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 ACTR10Q9NZ32 417 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 AAR2Q9Y312 384 aaKnown RBP11.32□□□□□ -0.6
GARNL3-210ENST00000453030 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
GARNL3-210ENST00000453030 PCDHGB7Q9Y5F8 929 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 ZGRF1Q86YA3 2104 aa11.32□□□□□ -0.6
GARNL3-210ENST00000453030 AGAP14A8MT82 685 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 C2orf74A8MZ97 194 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 AKR1B15C9JRZ8 316 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-210ENST00000453030 PJA2O43164 708 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 KRT86O43790 486 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 STK10O94804 968 aaKnown RBP11.31□□□□□ -0.6
GARNL3-210ENST00000453030 RBP3P10745 1247 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 HADHAP40939 763 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 RRADP55042 308 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 EIF3EP60228 445 aaKnown RBP11.31□□□□□ -0.6
GARNL3-210ENST00000453030 SLC9A5Q14940 896 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 ZRANB3Q5FWF4 1079 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 C1orf189Q5VU69 101 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 C11orf63Q6NUN7 778 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 SARM1Q6SZW1 724 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 CDHR3Q6ZTQ4 885 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 MED25Q71SY5 747 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 MRGPREQ86SM8 312 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 HOOK3Q86VS8 718 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 SERPINA9Q86WD7 417 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 AMIGO1Q86WK6 493 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 RAB43Q86YS6 212 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 GPR135Q8IZ08 494 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 CLDN19Q8N6F1 224 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 TMEM102Q8N9M5 508 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-210ENST00000453030 RNF214Q8ND24 703 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 SGSM3Q96HU1 749 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 SYTL2Q9HCH5 934 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 ZDHHC3Q9NYG2 299 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 SERTAD3Q9UJW9 196 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 PADI2Q9Y2J8 665 aa11.31□□□□□ -0.6
GARNL3-210ENST00000453030 LRBAP50851 2863 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 IGLV3-16A0A075B6K0 115 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 C17orf113A0A1B0GUU1 675 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 LDB2O43679 373 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 MSL3P1P0C860 447 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 AGXTP21549 392 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 ACRV1P26436 265 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 FOXL2P58012 376 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 MSLNQ13421 630 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-210ENST00000453030 BOP1Q14137 746 aaKnown RBP11.3□□□□□ -0.6
GARNL3-210ENST00000453030 ZNF658BQ4V348 819 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-210ENST00000453030 MLIPQ5VWP3 458 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 ZNF385CQ66K41 422 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-210ENST00000453030 DENND5AQ6IQ26 1287 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 DARS2Q6PI48 645 aaKnown RBP11.3□□□□□ -0.6
GARNL3-210ENST00000453030 SPESP1Q6UW49 350 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 TAS2R42Q7RTR8 314 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 ADGRF3Q8IZF5 1079 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 C19orf47Q8N9M1 422 aaKnown RBP11.3□□□□□ -0.6
GARNL3-210ENST00000453030 GLIS1Q8NBF1 620 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 OR5AR1Q8NGP9 310 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 HEXDCQ8WVB3 486 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 TFGQ92734 400 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-210ENST00000453030 PNPLA2Q96AD5 504 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 C19orf60Q96EN9 201 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 SPATA13Q96N96 652 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 TFB2MQ9H5Q4 396 aaKnown RBP11.3□□□□□ -0.6
GARNL3-210ENST00000453030 MVB12BQ9H7P6 319 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 IRAK4Q9NWZ3 460 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 ICKQ9UPZ9 632 aa11.3□□□□□ -0.6
GARNL3-210ENST00000453030 CCDC78A2IDD5 438 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 HCRTR1O43613 425 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 OR2B3O76000 313 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 HBQ1P09105 142 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 CBSLP0DN79 551 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 UGT2B7P16662 529 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 CTNNA1P35221 906 aaKnown RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 CBSP35520 551 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 FOLR3P41439 243 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 POU6F1Q14863 301 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 BRD3Q15059 726 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 NR6A1Q15406 480 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 GPR33Q49SQ1 333 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 VWA5B1Q5TIE3 1220 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 AADACL2Q6P093 401 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 ZNF449Q6P9G9 518 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 HPS6Q86YV9 775 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
GARNL3-210ENST00000453030 SMAD5Q99717 465 aaKnown RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 DPH2Q9BQC3 489 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-210ENST00000453030 DHRS4Q9BTZ2 278 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms