RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ETS1P14921 441 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 NELFEP18615 380 aaKnown RBP21.1■□□□□ 0.97
C9orf3-208ENST00000451893 FDFT1P37268 417 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 STAT5AP42229 794 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 MAGEA6P43360 314 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 VPS41P49754 854 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 ZNF140P52738 457 aaPredicted RBP21.1■□□□□ 0.97
C9orf3-208ENST00000451893 CBLBQ13191 982 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 POU6F1Q14863 301 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 GPR33Q49SQ1 333 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 TMTC4Q5T4D3 741 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 RNASEH2BQ5TBB1 312 aaKnown RBP21.1■□□□□ 0.97
C9orf3-208ENST00000451893 PPP1R21Q6ZMI0 780 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 RELL1Q8IUW5 271 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 DNAAF3Q8N9W5 541 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 GLIS1Q8NBF1 620 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 KLHL6Q8WZ60 621 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 DNAJC1Q96KC8 554 aaKnown RBP21.1■□□□□ 0.97
C9orf3-208ENST00000451893 MAP3K3Q99759 626 aa21.1■□□□□ 0.97
C9orf3-208ENST00000451893 GEMIN8Q9NWZ8 242 aaKnown RBP21.1■□□□□ 0.97
C9orf3-208ENST00000451893 KALRNO60229 2985 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 OR6C74A6NCV1 312 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 OR5K3A6NET4 321 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 TLCD2A6NGC4 264 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 E7EVH7 732 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 TP73O15350 636 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 SPAG6O75602 509 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 TPH1P17752 444 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 PRLHRP49683 370 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 PPP1CAP62136 330 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 XIAPP98170 497 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 CDK16Q00536 496 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 DHX9Q08211 1270 aaKnown RBP21.09■□□□□ 0.97
C9orf3-208ENST00000451893 KCNAB2Q13303 367 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 DEFB109BQ30KR1 87 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 LINC00523Q86TU6 105 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 ZFPM2Q8WW38 1151 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.09■□□□□ 0.97
C9orf3-208ENST00000451893 FERD3LQ96RJ6 166 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 TXLNGYQ9BZA5 131 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 FANCEQ9HB96 536 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 ZDHHC3Q9NYG2 299 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 IL17BQ9UHF5 180 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 KCND3Q9UK17 655 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 CROTQ9UKG9 612 aa21.09■□□□□ 0.97
C9orf3-208ENST00000451893 GCN1Q92616 2671 aaKnown RBP21.09■□□□□ 0.97
C9orf3-208ENST00000451893 ZNF462Q96JM2 2506 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 IGHV5-51A0A0C4DH38 117 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 EIF3HO15372 352 aaKnown RBP eCLIP21.08■□□□□ 0.97
C9orf3-208ENST00000451893 FGF5P12034 268 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 ZNF28P17035 718 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 NFKB2Q00653 900 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 GPS2Q13227 327 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.08■□□□□ 0.97
C9orf3-208ENST00000451893 ATG14Q6ZNE5 492 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 TRMT10CQ7L0Y3 403 aaKnown RBP21.08■□□□□ 0.97
C9orf3-208ENST00000451893 KMT5CQ86Y97 462 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 SPDYE1Q8NFV5 336 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-208ENST00000451893 LINC00615Q96LM1 132 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-208ENST00000451893 C19orf43Q9BQ61 176 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 SPRY4Q9C004 299 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 KIR3DX1Q9H7L2 352 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 ARNT2Q9HBZ2 717 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 STARD5Q9NSY2 213 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 PIH1D1Q9NWS0 290 aaKnown RBP21.08■□□□□ 0.97
C9orf3-208ENST00000451893 SLC24A2Q9UI40 661 aa21.08■□□□□ 0.97
C9orf3-208ENST00000451893 CCDC78A2IDD5 438 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 GSAPA4D1B5 854 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 PYCARD-AS1I3L0S3 204 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 EBLN1P0CF75 366 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 CDH3P22223 829 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 ACRV1P26436 265 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 ARCN1P48444 511 aaKnown RBP21.07■□□□□ 0.96
C9orf3-208ENST00000451893 HSD11B2P80365 405 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 CACNG1Q06432 222 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 KCNAB1Q14722 419 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 SERPINA9Q86WD7 417 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 NAT8LQ8N9F0 302 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 OR4E2Q8NGC2 313 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 STYXQ8WUJ0 223 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 APOBEC4Q8WW27 367 aaKnown RBP21.07■□□□□ 0.96
C9orf3-208ENST00000451893 LCN9Q8WX39 176 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 CPT1BQ92523 772 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 RMDN2Q96LZ7 410 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 TTC1Q99614 292 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 SRMSQ9H3Y6 488 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 NLE1Q9NVX2 485 aaPredicted RBP21.07■□□□□ 0.96
C9orf3-208ENST00000451893 PADI1Q9ULC6 663 aa21.07■□□□□ 0.96
C9orf3-208ENST00000451893 MRPS18BQ9Y676 258 aaKnown RBP21.07■□□□□ 0.96
C9orf3-208ENST00000451893 LDB2O43679 373 aa21.06■□□□□ 0.96
C9orf3-208ENST00000451893 METTL18O95568 372 aa21.06■□□□□ 0.96
C9orf3-208ENST00000451893 ZBTB11O95625 1053 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-208ENST00000451893 AP2A1O95782 977 aa21.06■□□□□ 0.96
C9orf3-208ENST00000451893 POLR2CP19387 275 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-208ENST00000451893 PMS2P54278 862 aa21.06■□□□□ 0.96
C9orf3-208ENST00000451893 SARNPP82979 210 aaKnown RBP21.06■□□□□ 0.96
C9orf3-208ENST00000451893 ERV3-1Q14264 604 aa21.06■□□□□ 0.96
C9orf3-208ENST00000451893 SKIDA1Q1XH10 827 aa21.06■□□□□ 0.96
C9orf3-208ENST00000451893 DENND5AQ6IQ26 1287 aa21.06■□□□□ 0.96
C9orf3-208ENST00000451893 PRUNE1Q86TP1 453 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms