RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 KRT33BQ14525 404 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 BRD3Q15059 726 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 KCTD19Q17RG1 926 aaPredicted RBP11.98□□□□□ -0.49
MSH5-209ENST00000450148 LCN10Q6JVE6 187 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 TMEM135Q86UB9 458 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 AMIGO1Q86WK6 493 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 OR4L1Q8NH43 312 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 OR8K5Q8NH50 307 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 LKAAEAR1Q8TD35 194 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 APOBEC4Q8WW27 367 aaKnown RBP11.98□□□□□ -0.49
MSH5-209ENST00000450148 ELMO1Q92556 727 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 LRFN5Q96NI6 719 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 ALS2CR12Q96Q35 445 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 FAM117AQ9C073 453 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 EIF2B3Q9NR50 452 aaKnown RBP11.98□□□□□ -0.49
MSH5-209ENST00000450148 CHRAC1Q9NRG0 131 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 TREX1Q9NSU2 369 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 ACTR10Q9NZ32 417 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 MARCH4Q9P2E8 410 aaPredicted RBP11.98□□□□□ -0.49
MSH5-209ENST00000450148 KCND3Q9UK17 655 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 ZKSCAN5Q9Y2L8 839 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 SPTA1P02549 2419 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 ANKRD12Q6UB98 2062 aa11.98□□□□□ -0.49
MSH5-209ENST00000450148 PCSK5Q92824 1860 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 GSAPA4D1B5 854 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 C21orf140B9A014 251 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 E7EVH7 732 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 H3BMH7 237 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 HCRTR1O43613 425 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 CPNE3O75131 537 aaKnown RBP11.97□□□□□ -0.49
MSH5-209ENST00000450148 KATNA1O75449 491 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 GPC4O75487 556 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 SCRG1O75711 98 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 FGGP02679 453 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 OR56A5P0C7T3 313 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 CCR7P32248 378 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 RORAP35398 523 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 GABRA4P48169 554 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 LMAN1P49257 510 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 RPS18P62269 152 aaKnown RBP11.97□□□□□ -0.49
MSH5-209ENST00000450148 CRADDP78560 199 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 PCID2Q5JVF3 399 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 PLEKHS1Q5SXH7 462 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 TMTC4Q5T4D3 741 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 LYPLAL1Q5VWZ2 237 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 UNC5AQ6ZN44 842 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 NLRP9Q7RTR0 991 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 PRICKLE2Q7Z3G6 844 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 LDB1Q86U70 411 aaPredicted RBP11.97□□□□□ -0.49
MSH5-209ENST00000450148 TMEM126BQ8IUX1 230 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 VRK3Q8IV63 474 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 TBC1D21Q8IYX1 336 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 CCDC89Q8N998 374 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 OR1L3Q8NH93 324 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.97□□□□□ -0.49
MSH5-209ENST00000450148 ABHD17AQ96GS6 310 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 OR2A14Q96R47 310 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 MENTQ9BUN1 341 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 AP1M1Q9BXS5 423 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 ACTL8Q9H568 366 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 SOHLH2Q9NX45 425 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 SPHK1Q9NYA1 384 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 POLHQ9Y253 713 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 PCDHB3Q9Y5E6 796 aa11.97□□□□□ -0.49
MSH5-209ENST00000450148 PCM1Q15154 2024 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 TCRBV7S3A2A0A539 114 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 IQCF5A8MTL0 148 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 C2orf74A8MZ97 194 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 K7EM74 188 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 GAS8O95995 478 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 CAPN1P07384 714 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 ARNTP27540 789 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 NMBRP28336 390 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 PTPN4P29074 926 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 PEBP1P30086 187 aaKnown RBP11.96□□□□□ -0.49
MSH5-209ENST00000450148 CXCR5P32302 372 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 PLOD1Q02809 727 aaPredicted RBP11.96□□□□□ -0.49
MSH5-209ENST00000450148 GRB7Q14451 532 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 ZIC1Q15915 447 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 FASTKD1Q53R41 847 aaKnown RBP11.96□□□□□ -0.49
MSH5-209ENST00000450148 IZUMO3Q5VZ72 239 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 ZNF385CQ66K41 422 aaPredicted RBP11.96□□□□□ -0.49
MSH5-209ENST00000450148 ZNF449Q6P9G9 518 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 SPESP1Q6UW49 350 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 ATG14Q6ZNE5 492 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 CDHR3Q6ZTQ4 885 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 PTRH1Q86Y79 214 aaKnown RBP11.96□□□□□ -0.49
MSH5-209ENST00000450148 SLC22A15Q8IZD6 547 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 DSELQ8IZU8 1212 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 PRELID2Q8N945 189 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 TRIM58Q8NG06 486 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 OR6P1Q8NGX9 317 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 OR5K2Q8NHB8 316 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 C9orf43Q8TAL5 461 aaPredicted RBP11.96□□□□□ -0.49
MSH5-209ENST00000450148 CARD6Q9BX69 1037 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 GPR87Q9BY21 358 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 TRIM4Q9C037 500 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 KLHL25Q9H0H3 589 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 P2RY12Q9H244 342 aa11.96□□□□□ -0.49
MSH5-209ENST00000450148 SYTL2Q9HCH5 934 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms