RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CMTM5Q96DZ9 223 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 GUCD1Q96NT3 240 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 CCT7Q99832 543 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 DPEP2Q9H4A9 486 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 TUBB1Q9H4B7 451 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 PHPT1Q9NRX4 125 aaPredicted RBP13.93□□□□□ -0.18
USP39-207ENST00000450066 KLC4Q9NSK0 619 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 NDRG2Q9UN36 371 aaKnown RBP13.93□□□□□ -0.18
USP39-207ENST00000450066 OR1A2Q9Y585 309 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 ST14Q9Y5Y6 855 aa13.93□□□□□ -0.18
USP39-207ENST00000450066 TCRBV21S2A2A0A5A6 115 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 ARHGEF33A8MVX0 844 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 H0YHG0 523 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 OR4F21O95013 312 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 NQO1P15559 274 aaKnown RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 EPB42P16452 691 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 SLC6A12P48065 614 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 MNAT1P51948 309 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 CCNG1P51959 295 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 KCNJ2P63252 427 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 KLF10Q13118 480 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 LETMD1Q6P1Q0 360 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 DOK6Q6PKX4 331 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 CRTC3Q6UUV7 619 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 XKR5Q6UX68 686 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 KIAA1324Q6UXG2 1013 aaKnown RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 LRRC70Q7Z2Q7 622 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 LRRTM4Q86VH4 590 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 FBXL8Q96CD0 374 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 C3orf30Q96M34 536 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 BTBD10Q9BSF8 475 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 SLC32A1Q9H598 525 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 PFDN4Q9NQP4 134 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 DUSP12Q9UNI6 340 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 TIMM22Q9Y584 194 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 DNMT3AQ9Y6K1 912 aaPredicted RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 VPS4BO75351 444 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 KATNA1O75449 491 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 MYCLP1P12525 358 aaPredicted RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 GABRG2P18507 467 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 PRDX6P30041 224 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 MAGEA9P43362 315 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 TPMTP51580 245 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 TRAF3Q13114 568 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 NAA25Q14CX7 972 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 ZXDCQ2QGD7 858 aaPredicted RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 FAM219BQ5XKK7 198 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 FAM124AQ86V42 546 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 AMZ2Q86W34 360 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 HOMEZQ8IX15 550 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 DDIASQ8IXT1 998 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 OXR1Q8N573 874 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 CDYL2Q8N8U2 506 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 FBXO15Q8NCQ5 510 aaPredicted RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 OR4F6Q8NGB9 312 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 CFAP61Q8NHU2 1237 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 CCDC138Q96M89 665 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 CATSPER2Q96P56 530 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 CDK15Q96Q40 435 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 NTMT1Q9BV86 223 aa13.92□□□□□ -0.18
USP39-207ENST00000450066 PCYT1BQ9Y5K3 369 aaPredicted RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 COPG1Q9Y678 874 aaKnown RBP13.92□□□□□ -0.18
USP39-207ENST00000450066 ATP6AP2A0A1C7CYW4 349 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 KLHL33A6NCF5 533 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 UBDO15205 165 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 ATP6AP2O75787 350 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 RPA4Q13156 261 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 MILR1Q7Z6M3 343 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 ZNF687Q8N1G0 1237 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 METTL6Q8TCB7 284 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 ATL1Q8WXF7 558 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 TBC1D10AQ9BXI6 508 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 AKTIPQ9H8T0 292 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.91□□□□□ -0.18
USP39-207ENST00000450066 TAS2R1Q9NYW7 299 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 CAPN1P07384 714 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 LINC00032P0C843 101 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 EBLN1P0CF75 366 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 CHRNB1P11230 501 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 IL9P15248 144 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 MAT2AP31153 395 aaKnown RBP13.91□□□□□ -0.18
USP39-207ENST00000450066 IGFALSP35858 605 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 ARL1P40616 181 aaPredicted RBP13.91□□□□□ -0.18
USP39-207ENST00000450066 PPP2CBP62714 309 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 PPP2CAP67775 309 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 NFE2L1Q14494 772 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 PTCHD3Q3KNS1 767 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 XKR7Q5GH72 579 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 TRIM69Q86WT6 500 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 SYNPOQ8N3V7 929 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 DCBLD1Q8N8Z6 715 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 FOXJ1Q92949 421 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 RAB3IPQ96QF0 476 aaPredicted RBP13.91□□□□□ -0.18
USP39-207ENST00000450066 POLMQ9NP87 494 aaPredicted RBP13.91□□□□□ -0.18
USP39-207ENST00000450066 G3BP2Q9UN86 482 aaKnown RBP13.91□□□□□ -0.18
USP39-207ENST00000450066 BTRCQ9Y297 605 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 PRKAB1Q9Y478 270 aa13.91□□□□□ -0.18
USP39-207ENST00000450066 PTGDR2Q9Y5Y4 395 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms