RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SYT11Q9BT88 431 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 ZIM2Q9NZV7 527 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 UNCXA6NJT0 531 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 PSMD11O00231 422 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 RNASEH2AO75792 299 aaKnown RBP10.23□□□□□ -0.77
CTC1-202ENST00000449476 HIST1H2ABP04908 130 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 CCR3P51677 355 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 PSRC1Q6PGN9 363 aaPredicted RBP10.23□□□□□ -0.77
CTC1-202ENST00000449476 HIST3H2AQ7L7L0 130 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 PARGQ86W56 976 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 SRFBP1Q8NEF9 429 aaKnown RBP10.23□□□□□ -0.77
CTC1-202ENST00000449476 DNAJB8Q8NHS0 232 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 HIST1H2ACQ93077 130 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 KIAA1191Q96A73 305 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 LMAN2LQ9H0V9 348 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 TMEM248Q9NWD8 314 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 ZDHHC3Q9NYG2 299 aa10.23□□□□□ -0.77
CTC1-202ENST00000449476 BHMG1C9JSJ3 638 aaPredicted RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 PLK4O00444 970 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 HLA-DQA2P01906 255 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 POU2F1P14859 743 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 CCNFP41002 786 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 DGKGP49619 791 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 PTPN5P54829 565 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 ZBTB6Q15916 424 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 DCST1Q5T197 706 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 ARMC3Q5W041 872 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 PHC3Q8NDX5 983 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 TRPV3Q8NET8 790 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 SH3RF2Q8TEC5 729 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 CAPSLQ8WWF8 208 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 TOP1MTQ969P6 601 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 SLC2A13Q96QE2 648 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 AASDHPPTQ9NRN7 309 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 MAT2BQ9NZL9 334 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 N6AMT1Q9Y5N5 214 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 LOC110117498-PIK3R3F6TDL0 507 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 DCLK1O15075 740 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 SNPHO15079 494 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 BCAS2O75934 225 aaPredicted RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 EPOP01588 193 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 VARSP26640 1264 aaKnown RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 HEPACAMQ14CZ8 416 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 SNAPC1Q16533 368 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 NADK2Q4G0N4 442 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 CARD16Q5EG05 197 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 UBAP2Q5T6F2 1119 aaKnown RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 EGFLAMQ63HQ2 1017 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 RGL4Q8IZJ4 473 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 OR2AP1Q8NGE2 309 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 OR5K1Q8NHB7 308 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 TRIM63Q969Q1 353 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 DUS2Q9NX74 493 aaKnown RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 GIMAP2Q9UG22 337 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 ASB3Q9Y575 518 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 LAMB4A4D0S4 1761 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 TRBV23OR9-2A0A075B6M9 112 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 A0A1W2PP18 115 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 CCDC182A6NF36 153 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 ARVCFO00192 962 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 PI15O43692 258 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 PRAMEF11O60813 436 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 MTX2O75431 263 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 CDH1P12830 882 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 PRPS1L1P21108 318 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 PSMA1P25786 263 aaKnown RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 TPP2P29144 1249 aaPredicted RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 UFM1P61960 85 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 IFI44LQ53G44 452 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 DDI2Q5TDH0 399 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 SLC2A7Q6PXP3 512 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 ATG14Q6ZNE5 492 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 TMEM135Q86UB9 458 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 ENDOVQ8N8Q3 282 aaKnown RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 OR4F6Q8NGB9 312 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 AUTS2Q8WXX7 1259 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 AP3S1Q92572 193 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 GTPBP3Q969Y2 492 aaKnown RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 KCNA7Q96RP8 456 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 RSPH9Q9H1X1 276 aaPredicted RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 ACTR3BQ9P1U1 418 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 TRPS1Q9UHF7 1281 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 MTMR11A4FU01 709 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 TAF4O00268 1085 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 OR1F1O43749 312 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 CLDN7O95471 211 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 APODP05090 189 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 GDF5P43026 501 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 PPP1R8Q12972 351 aaKnown RBP10.22□□□□□ -0.77
CTC1-202ENST00000449476 HSPB3Q12988 150 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 SFT2D3Q587I9 215 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 ZNF730Q6ZMV8 503 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 AGMOQ6ZNB7 445 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 FAM92BQ6ZTR7 304 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 CYS1Q717R9 158 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 UTS2BQ765I0 119 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 COMMD2Q86X83 199 aa10.22□□□□□ -0.77
CTC1-202ENST00000449476 KLHL23Q8NBE8 558 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms