RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 DBTP11182 482 aaKnown RBP12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 POLR2JP52435 117 aaKnown RBP12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 DCST1Q5T197 706 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 ADGRF1Q5T601 910 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 MTERF1Q99551 399 aaKnown RBP12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 CTPS2Q9NRF8 586 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 DNAAF2Q9NVR5 837 aaKnown RBP12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 RHBDL2Q9NX52 303 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 TAC3Q9UHF0 121 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 A0A0J9YYE9 177 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 NPIPA5E9PKD4 350 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 ERI3O43414 337 aaKnown RBP12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 AKAP8O43823 692 aaKnown RBP12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 CTSKP43235 329 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 BNIP1Q12981 228 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 DHDDSQ86SQ9 333 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 OR6K6Q8NGW6 343 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 NPAS2Q99743 824 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 CCM2Q9BSQ5 444 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 TRIM2Q9C040 744 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 NPIPA1Q9UND3 350 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 TRIM64BA6NI03 449 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 BDKRB1P46663 353 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 ARHGAP1Q07960 439 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 LY6G5CQ5SRR4 150 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 TAS1R3Q7RTX0 852 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 PNPLA2Q96AD5 504 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 FZD10Q9ULW2 581 aa12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 CICQ96RK0 1608 aaPredicted RBP12.53□□□□□ -0.4
AC006001.3-201ENST00000449307 YJEFN3A6XGL0 299 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 E7ENQ6 273 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 ACVR2AP27037 513 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 IL12RB1P42701 662 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 RAB2AP61019 212 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 SLC1A5Q15758 541 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 EIPR1Q53HC9 387 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 SLC39A5Q6ZMH5 540 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 TTLQ8NG68 377 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 TWIST2Q8WVJ9 160 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 FUBP3Q96I24 572 aaKnown RBP eCLIP12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 SUSD3Q96L08 255 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 MIPEPQ99797 713 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 RHOJQ9H4E5 214 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 TCAF1Q9Y4C2 921 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 CEBPGP53567 150 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 DGLUCYQ7Z3D6 616 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 CLNKQ7Z7G1 428 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 PTCD3Q96EY7 689 aaKnown RBP12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 MMABQ96EY8 250 aaPredicted RBP12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 CEP295NLQ96MC4 621 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 PPM1MQ96MI6 270 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 SPATA31D1Q6ZQQ2 1576 aa12.52□□□□□ -0.4
AC006001.3-201ENST00000449307 CIB4A0PJX0 185 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 NMBRP28336 390 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 HSD17B2P37059 387 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 CACNA2D1P54289 1103 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 MRPS35P82673 323 aaKnown RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 GBE1Q04446 702 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 PRAMEF14Q5SWL7 426 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 PRAMEF13Q5VWM6 474 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 CLEC6AQ6EIG7 209 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 PGBD2Q6P3X8 592 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 BBS12Q6ZW61 710 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 STX12Q86Y82 276 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 ZNF514Q96K75 400 aaPredicted RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 IFT27Q9BW83 186 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 SUSD2Q9UGT4 822 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 EIF2B4Q9UI10 523 aaKnown RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 AFDNP55196 1824 aaKnown RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 A0A1W2PP55 124 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 DHX15O43143 795 aaKnown RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 PLOD3O60568 738 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 NUDT17P0C025 328 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 JUNDP17535 347 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 PREPP48147 710 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 SYVN1Q86TM6 617 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 C12orf40Q86WS4 652 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 SLC22A8Q8TCC7 542 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 ZSCAN5AQ9BUG6 496 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 TBC1D10AQ9BXI6 508 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 UPB1Q9UBR1 384 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 HEPACAM2A8MVW5 462 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 TNFRSF10BO14763 440 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 C9P02748 559 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 SOD2P04179 222 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 L1CAMP32004 1257 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 NDUFA5Q16718 116 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 IL23RQ5VWK5 629 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 BOLLQ8N9W6 283 aaKnown RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 KCNJ9Q92806 393 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 MKKSQ9NPJ1 570 aaPredicted RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 IFT80Q9P2H3 777 aaPredicted RBP12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 CD207Q9UJ71 328 aa12.52□□□□□ -0.41
AC006001.3-201ENST00000449307 C3orf18Q9UK00 162 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms