RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TCF12Q99081 682 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 PITPNM3Q9BZ71 974 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 SRMSQ9H3Y6 488 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 XKR8Q9H6D3 395 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 XAB2Q9HCS7 855 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 ICKQ9UPZ9 632 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 BTRCQ9Y297 605 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 PCDHGA4Q9Y5G9 962 aa13.66□□□□□ -0.22
RTFDC1-204ENST00000449062 LOC101059948A0A1B0GTJ6 334 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 GOLGA8KD6RF30 607 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 GOLGA8TH3BQL2 631 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 ERVH48-1M5A8F1 160 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 BTN3A1O00481 513 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 TIAF1O95411 115 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 ZBTB11O95625 1053 aaPredicted RBP13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 S1PR4O95977 384 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 LIFP15018 202 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 ITGB6P18564 788 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 ADARP55265 1226 aaKnown RBP13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 GNG11P61952 73 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 CTSL3PQ5NE16 218 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 NEPROQ6NW34 567 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 UNC5AQ6ZN44 842 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 CENPUQ71F23 418 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 BPHLQ86WA6 291 aaPredicted RBP13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 AMIGO1Q86WK6 493 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 LRRC6Q86X45 466 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 NLGN4XQ8N0W4 816 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 NLGN4YQ8NFZ3 816 aaPredicted RBP13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 OR5K2Q8NHB8 316 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 ASZ1Q8WWH4 475 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 MENTQ9BUN1 341 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 DDX47Q9H0S4 455 aaKnown RBP13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 LATS2Q9NRM7 1088 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 C1GALT1Q9NS00 363 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 KCND1Q9NSA2 647 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 ANAPC5Q9UJX4 755 aa13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 GCN1Q92616 2671 aaKnown RBP13.65□□□□□ -0.22
RTFDC1-204ENST00000449062 BAHCC1Q9P281 2608 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 UBA6A0AVT1 1052 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 SLC9B1P1A6NJY1 282 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 GOLGA8MH3BSY2 632 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 MATN2O00339 956 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 NDUFS3O75489 264 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 EBLN1P0CF75 366 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 F8A1P23610 371 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 ATP1A2P50993 1020 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 ABHD18Q0P651 414 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 HSPA14Q0VDF9 509 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 GBX1Q14549 363 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 LINC00303Q3SY05 128 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 DNAJC21Q5F1R6 531 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 ZNF789Q5FWF6 425 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 PWWP2BQ6NUJ5 590 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 PPIL6Q8IXY8 311 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 SIDT2Q8NBJ9 832 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 GRK7Q8WTQ7 553 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 SLC39A7Q92504 469 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 ZNF501Q96CX3 271 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 SLC45A3Q96JT2 553 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 TRAPPC9Q96Q05 1148 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 HGH1Q9BTY7 390 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 TRIT1Q9H3H1 467 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 FGF21Q9NSA1 209 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 SPHK1Q9NYA1 384 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 IL17BQ9UHF5 180 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 POLG2Q9UHN1 485 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 ASF1AQ9Y294 204 aa13.64□□□□□ -0.23
RTFDC1-204ENST00000449062 GOLGA6L10A0A0M3HER8 536 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 F8W8V4 182 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 TP73O15350 636 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 C1QL1O75973 258 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 MSL3P1P0C860 447 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 ST6GAL1P15907 406 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 STAT5AP42229 794 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 CSE1LP55060 971 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 TUBB4BP68371 445 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 CYP4F2P78329 520 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 ACY1Q03154 408 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 ABRQ12979 859 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 PTK6Q13882 451 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 TUBB2AQ13885 445 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 KYNUQ16719 465 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 MRNIPQ6NTE8 343 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 ARMC6Q6NXE6 501 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 C6orf15Q6UXA7 325 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 SDCCAG8Q86SQ7 713 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 PPP1R3BQ86XI6 285 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 CILP2Q8IUL8 1156 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 UNC5BQ8IZJ1 945 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 ESX1Q8N693 406 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 IL22RA1Q8N6P7 574 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 EXD3Q8N9H8 876 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 ANP32BQ92688 251 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 ELMO2Q96JJ3 720 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 OR2A14Q96R47 310 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 TUBB2BQ9BVA1 445 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 ULBP3Q9BZM4 244 aa13.63□□□□□ -0.23
RTFDC1-204ENST00000449062 AKIRIN1Q9H9L7 192 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms