RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ARHGEF33A8MVX0 844 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 DFNA5O60443 496 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 C1orf105O95561 183 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 CATP04040 527 aaKnown RBP13.7□□□□□ -0.22
SHMT2-203ENST00000449049 MTHFD2P13995 350 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 CHN1P15882 459 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 CYP2A7P20853 494 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 HALP42357 657 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 IRX4P78413 519 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 CDKL1Q00532 357 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 TGFBIQ15582 683 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 RPE65Q16518 533 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 HLA-BQ31612 363 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.7□□□□□ -0.22
SHMT2-203ENST00000449049 ZYG11AQ6WRX3 759 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 GPSM1Q86YR5 675 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 CFAP61Q8NHU2 1237 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 FAM76AQ8TAV0 307 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 C12orf66Q96MD2 445 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 KCNH6Q9H252 994 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 COPG2Q9UBF2 871 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 ASF1AQ9Y294 204 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 CSNK1G3Q9Y6M4 447 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 LMO7DNF2Z398 122 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 ARHGAP33O14559 1287 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 YKT6O15498 198 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 KLK8O60259 260 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 SDC3O75056 442 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 PCLAFQ15004 111 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 FRA10AC1Q70Z53 315 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 CCDC63Q8NA47 563 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 OR5K2Q8NHB8 316 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 NUDT4Q9NZJ9 180 aa13.7□□□□□ -0.22
SHMT2-203ENST00000449049 UBXN8O00124 270 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 YY2O15391 372 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 RPN2P04844 631 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 SYPP08247 313 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MTHFD1P11586 935 aaKnown RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 SLC2A4P14672 509 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 CPA3P15088 417 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 EPHA8P29322 1005 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 BDKRB1P46663 353 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 SERPINB4P48594 390 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 RPIAP49247 311 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 ATP1A2P50993 1020 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 AP1S2P56377 157 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 CDKL4Q5MAI5 379 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 IYDQ6PHW0 289 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 KANSL1Q7Z3B3 1105 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 DCUN1D3Q8IWE4 304 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 TBC1D21Q8IYX1 336 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 PDPRQ8NCN5 879 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 OR5AR1Q8NGP9 310 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MGARPQ8TDB4 240 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MCOLN3Q8TDD5 553 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 NUSAP1Q9BXS6 441 aaKnown RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MLXIPLQ9NP71 852 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 UCKL1Q9NWZ5 548 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 UTP6Q9NYH9 597 aaKnown RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 TMCO1Q9UM00 188 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 HEBP2Q9Y5Z4 205 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 CFAP20Q9Y6A4 193 aaKnown RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 OR5K4A6NMS3 321 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 OR52A4PA6NMU1 304 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 SUPT3HB4E1H0 165 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MYO1CO00159 1063 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 POLR3GO15318 223 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 FFAR2O15552 330 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 DLX3O60479 287 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 SMIM24O75264 130 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 SUPT3HO75486 399 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 CER1O95813 267 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 BPGMP07738 259 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 RETP07949 1114 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 TPBGLP0DKB5 382 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MYL2P10916 166 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 TAC1P20366 129 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 ATP5F1P24539 256 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MAP4P27816 1152 aaKnown RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 NFKB2Q00653 900 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 BNIP3Q12983 259 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 CCSMST1Q4G0I0 132 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 HHATQ5VTY9 493 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 DUS1LQ6P1R4 473 aaKnown RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 NAGSQ8N159 534 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 SLC25A45Q8N413 288 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 FAM46DQ8NEK8 389 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MAGEC3Q8TD91 643 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 EXT2Q93063 718 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 TRIM54Q9BYV2 358 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 TRIT1Q9H3H1 467 aaKnown RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 GAREM1Q9H706 876 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 MVB12BQ9H7P6 319 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 YY1AP1Q9H869 796 aa13.69□□□□□ -0.22
SHMT2-203ENST00000449049 IMP3Q9NV31 184 aaKnown RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 ZNF624Q9P2J8 865 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-203ENST00000449049 KIR2DS5A0A0G2JLQ3 304 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 A0A0G2JNG1 304 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 A8MT66 165 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 KIR2DS3K7RE56 304 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms