RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 D2HGDHQ8N465 521 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 IL22RA1Q8N6P7 574 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 SIDT2Q8NBJ9 832 aaKnown RBP12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 SLCO2A1Q92959 643 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 BIRC8Q96P09 236 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 UBL7Q96S82 380 aaPredicted RBP12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 TCF12Q99081 682 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 TRIT1Q9H3H1 467 aaKnown RBP12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 IL1RAPL1Q9NZN1 696 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 SAMD15Q9P1V8 674 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 POLG2Q9UHN1 485 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 GNPTGQ9UJJ9 305 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 POMT2Q9UKY4 750 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 ICKQ9UPZ9 632 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 RPS6KL1Q9Y6S9 549 aa12.37□□□□□ -0.43
PRPF40A-203ENST00000448428 ITPR1Q14643 2758 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 ZCWPW2A0A1B0GU75 182 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 GSAPA4D1B5 854 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 SLC9B1P1A6NJY1 282 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 MATN2O00339 956 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 SPAG6O75602 509 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 ZBTB11O95625 1053 aaPredicted RBP12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 DLGAP3O95886 979 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 APOA4P06727 396 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 PAMP19021 973 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 MAP4P27816 1152 aaKnown RBP12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 ARL4DP49703 201 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 EIF3BP55884 814 aaKnown RBP12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 RHDQ02161 417 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 PTK6Q13882 451 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 DHX34Q14147 1143 aaKnown RBP12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 TYSND1Q2T9J0 566 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 CTSL3PQ5NE16 218 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 PCSK4Q6UW60 755 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 UNC5AQ6ZN44 842 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 CENPUQ71F23 418 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 RASGRP3Q8IV61 690 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 KLHL7Q8IXQ5 586 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 NLGN4XQ8N0W4 816 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 CARFQ8N187 725 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 NLGN4YQ8NFZ3 816 aaPredicted RBP12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 OR5K2Q8NHB8 316 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 LPGAT1Q92604 370 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 ZNF669Q96BR6 464 aaPredicted RBP12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 PANX3Q96QZ0 392 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 ULBP3Q9BZM4 244 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 PDE7BQ9NP56 450 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 C1GALT1Q9NS00 363 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 ASIC3Q9UHC3 531 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 CRYL1Q9Y2S2 319 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 TDRKHQ9Y2W6 561 aaKnown RBP12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 MAD1L1Q9Y6D9 718 aa12.36□□□□□ -0.43
PRPF40A-203ENST00000448428 LOC101059948A0A1B0GTJ6 334 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 DNALI1O14645 258 aaPredicted RBP12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 KPNA5O15131 536 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 ATXN7O15265 892 aaPredicted RBP12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 TIAF1O95411 115 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 S1PR4O95977 384 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 LIFP15018 202 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 OGNP20774 298 aaKnown RBP12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 CDH3P22223 829 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 SHMT2P34897 504 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 TUBB3Q13509 450 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 GPR19Q15760 415 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 DNAJC21Q5F1R6 531 aaKnown RBP12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 ZNF789Q5FWF6 425 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 PPP1R3BQ86XI6 285 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 CILP2Q8IUL8 1156 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 UNC5BQ8IZJ1 945 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 C17orf53Q8N3J3 647 aaPredicted RBP12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 ZSCAN1Q8NBB4 408 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 CFAP61Q8NHU2 1237 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 TTC9Q92623 222 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 FGF21Q9NSA1 209 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 KCND1Q9NSA2 647 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 ACTR10Q9NZ32 417 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 GALPQ9UBC7 116 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 RARRES3Q9UL19 164 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 PLAGL1Q9UM63 463 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 BTRCQ9Y297 605 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 SNRNP200O75643 2136 aaKnown RBP12.35□□□□□ -0.43
PRPF40A-203ENST00000448428 SPTBP11277 2137 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 PIPSLA2A3N6 862 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 C2orf74A8MZ97 194 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 PFDN6O15212 129 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 NIPSNAP2O75323 286 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 USP1O94782 785 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 KIAA0754O94854 1291 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 ESR1P03372 595 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 F7P08709 466 aaPredicted RBP12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 PVRP15151 417 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 ST6GAL1P15907 406 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 ADARP55265 1226 aaKnown RBP12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 TUBB4BP68371 445 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 CYP4F2P78329 520 aa12.34□□□□□ -0.43
PRPF40A-203ENST00000448428 ACY1Q03154 408 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms