RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PANX3Q96QZ0 392 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 TAAR9Q96RI9 348 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 EBNA1BP2Q99848 306 aaKnown RBP14.42□□□□□ -0.1
HDAC4-204ENST00000446876 RAB33BQ9H082 229 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 SRMSQ9H3Y6 488 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 ZNF768Q9H5H4 540 aaKnown RBP14.42□□□□□ -0.1
HDAC4-204ENST00000446876 PLAC1Q9HBJ0 212 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 IARS2Q9NSE4 1012 aaKnown RBP14.42□□□□□ -0.1
HDAC4-204ENST00000446876 SIDT1Q9NXL6 827 aaKnown RBP14.42□□□□□ -0.1
HDAC4-204ENST00000446876 SLC17A6Q9P2U8 582 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 GALPQ9UBC7 116 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 ICKQ9UPZ9 632 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 RUVBL2Q9Y230 463 aaKnown RBP14.42□□□□□ -0.1
HDAC4-204ENST00000446876 TDRKHQ9Y2W6 561 aaKnown RBP14.42□□□□□ -0.1
HDAC4-204ENST00000446876 FAM169AQ9Y6X4 670 aa14.42□□□□□ -0.1
HDAC4-204ENST00000446876 SNRNP200O75643 2136 aaKnown RBP14.42□□□□□ -0.1
HDAC4-204ENST00000446876 AHCTF1Q8WYP5 2266 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 GSAPA4D1B5 854 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 BTN3A1O00481 513 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 ERVK-10P10266 1014 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 MC2RQ01718 297 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 SRSF6Q13247 344 aaKnown RBP14.41□□□□□ -0.1
HDAC4-204ENST00000446876 KCNAB1Q14722 419 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 TMED2Q15363 201 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 HIF1AQ16665 826 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 HSP90AA5PQ58FG0 334 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 ARMC6Q6NXE6 501 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 ANKMY2Q8IV38 441 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 PDIK1LQ8N165 341 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 LMNTD1Q8N9Z9 388 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 ASZ1Q8WWH4 475 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 ZNF592Q92610 1267 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 TCF12Q99081 682 aa14.41□□□□□ -0.1
HDAC4-204ENST00000446876 TRIT1Q9H3H1 467 aaKnown RBP14.41□□□□□ -0.1
HDAC4-204ENST00000446876 RALYQ9UKM9 306 aaKnown RBP14.41□□□□□ -0.1
HDAC4-204ENST00000446876 KRT87PA6NCN2 255 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 FAM187AA6NFU0 413 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 TLCD2A6NGC4 264 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 PFDN6O15212 129 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 URI1O94763 535 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-204ENST00000446876 SLCO2B1O94956 709 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 ESR1P03372 595 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 PKMP14618 531 aaKnown RBP14.4□□□□□ -0.1
HDAC4-204ENST00000446876 ARL4CP56559 192 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 PLOD1Q02809 727 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-204ENST00000446876 FOXM1Q08050 763 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 FASTKD3Q14CZ7 662 aaKnown RBP14.4□□□□□ -0.1
HDAC4-204ENST00000446876 SPANXN3Q5MJ09 141 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 TMEM164Q5U3C3 297 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 ZNF549Q6P9A3 640 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 UNC5AQ6ZN44 842 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 OTOAQ7RTW8 1153 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 AMIGO1Q86WK6 493 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 TBC1D21Q8IYX1 336 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 OR5K2Q8NHB8 316 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 KLHL6Q8WZ60 621 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 ELMO2Q96JJ3 720 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 SLC30A3Q99726 388 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 DDA1Q9BW61 102 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 TFB2MQ9H5Q4 396 aaKnown RBP14.4□□□□□ -0.1
HDAC4-204ENST00000446876 INTS10Q9NVR2 710 aaKnown RBP14.4□□□□□ -0.1
HDAC4-204ENST00000446876 FBXO5Q9UKT4 447 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 ACSL6Q9UKU0 697 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 PCDHGA3Q9Y5H0 932 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 NFS1Q9Y697 457 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 TEX264Q9Y6I9 313 aa14.4□□□□□ -0.1
HDAC4-204ENST00000446876 DSPP15924 2871 aaKnown RBP14.4□□□□□ -0.1
HDAC4-204ENST00000446876 PTPRQQ9UMZ3 2332 aa14.4□□□□□ -0.11
HDAC4-204ENST00000446876 TOX3O15405 576 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-204ENST00000446876 HAUS5O94927 633 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 NELFEP18615 380 aaKnown RBP14.39□□□□□ -0.11
HDAC4-204ENST00000446876 CHRM3P20309 590 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 BDKRB1P46663 353 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 ADARP55265 1226 aaKnown RBP14.39□□□□□ -0.11
HDAC4-204ENST00000446876 RAB15P59190 212 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 PDIA2Q13087 525 aaKnown RBP14.39□□□□□ -0.11
HDAC4-204ENST00000446876 PRKAA1Q13131 559 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 DCAF12Q5T6F0 453 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 TRMT10BQ6PF06 316 aaKnown RBP14.39□□□□□ -0.11
HDAC4-204ENST00000446876 CNSTQ6PJW8 725 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 ZNF572Q7Z3I7 529 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-204ENST00000446876 VASH2Q86V25 355 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 ADGRF3Q8IZF5 1079 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 GIMAP7Q8NHV1 300 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 CALML6Q8TD86 181 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 SKA2Q8WVK7 121 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-204ENST00000446876 UBXN4Q92575 508 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 OR6C1Q96RD1 312 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 ERP44Q9BS26 406 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 FAM167BQ9BTA0 163 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 KLHL25Q9H0H3 589 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 CPNE5Q9HCH3 593 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 FBXO8Q9NRD0 319 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 GRHL1Q9NZI5 618 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 SEMA5BQ9P283 1151 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 ZC3H7BQ9UGR2 993 aaKnown RBP14.39□□□□□ -0.11
HDAC4-204ENST00000446876 CDC23Q9UJX2 597 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 POMT2Q9UKY4 750 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 LHX6Q9UPM6 363 aa14.39□□□□□ -0.11
HDAC4-204ENST00000446876 MED16Q9Y2X0 877 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms