RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 LRRC36Q1X8D7 754 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 AP5B1Q2VPB7 878 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 COQ5Q5HYK3 327 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 SAMD4BQ5PRF9 694 aaKnown RBP17.06■□□□□ 0.32
SMC6-206ENST00000446852 RASGRP3Q8IV61 690 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 RAVER1Q8IY67 606 aaKnown RBP17.06■□□□□ 0.32
SMC6-206ENST00000446852 TSPEARQ8WU66 669 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 OBP2AQ9NY56 170 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 ZIM2Q9NZV7 527 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 ABCD2Q9UBJ2 740 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 BCAP29Q9UHQ4 241 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 RFXAPO00287 272 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 SLCO2B1O94956 709 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 G6PDP11413 515 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 POLR2JP52435 117 aaKnown RBP17.06■□□□□ 0.32
SMC6-206ENST00000446852 SLC44A4Q53GD3 710 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 PPP2R2DQ66LE6 453 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 FBXL19Q6PCT2 694 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 NRSN1Q8IZ57 195 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 LILRA3Q8N6C8 439 aaPredicted RBP17.06■□□□□ 0.32
SMC6-206ENST00000446852 PYCR2Q96C36 320 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 TRIM54Q9BYV2 358 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 LMAN2LQ9H0V9 348 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 MRPL40Q9NQ50 206 aaKnown RBP17.06■□□□□ 0.32
SMC6-206ENST00000446852 DZANK1Q9NVP4 752 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 HCN2Q9UL51 889 aa17.06■□□□□ 0.32
SMC6-206ENST00000446852 POLR3HQ9Y535 204 aaPredicted RBP17.06■□□□□ 0.32
SMC6-206ENST00000446852 H0Y858 1186 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 K7ESM1 405 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 AREL1O15033 823 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 LINC01565O15544 149 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 HIST1H2AGP0C0S8 130 aaPredicted RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 HIST1H2ADP20671 130 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 TMEM115Q12893 351 aaPredicted RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 PTCHD3Q3KNS1 767 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 TIGD2Q4W5G0 525 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 PAGE3Q5JUK9 113 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 NEK10Q6ZWH5 1172 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 SPATA24Q86W54 205 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 PQLC1Q8N2U9 271 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 MINDY1Q8N5J2 469 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 LRRC58Q96CX6 371 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 CHFRQ96EP1 664 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 HIST1H2AHQ96KK5 128 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 HIST1H2AJQ99878 128 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 HOPXQ9BPY8 73 aaPredicted RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 H2AFJQ9BTM1 129 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 TRIM8Q9BZR9 551 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 THG1LQ9NWX6 298 aaKnown RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 CNOT6Q9ULM6 557 aaKnown RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 MANBAO00462 879 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 CASQ2O14958 399 aaPredicted RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 ANKRD28O15084 1053 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 SLC16A5O15375 505 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 DNAJA2O60884 412 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 EEDO75530 441 aaKnown RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 ADRB3P13945 408 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 SLC6A2P23975 617 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 PREPP48147 710 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 PRLHRP49683 370 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 HMGCS1Q01581 520 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 FCHO2Q0JRZ9 810 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 GRM2Q14416 872 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 TRIP10Q15642 601 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 AAK1Q2M2I8 961 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 SGO1Q5FBB7 561 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 HABP4Q5JVS0 413 aaKnown RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 IL23RQ5VWK5 629 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 ZFP1Q6P2D0 407 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 NEK5Q6P3R8 708 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 CYP20A1Q6UW02 462 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 RNF165Q6ZSG1 346 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 LRRC70Q7Z2Q7 622 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 SLC15A3Q8IY34 581 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 TCAIMQ8N3R3 496 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 NUDT8Q8WV74 236 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 N4BP2L2Q92802 583 aaPredicted RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 ECSITQ9BQ95 431 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 PLA2G2FQ9BZM2 168 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 ZNHIT2Q9UHR6 403 aa17.05■□□□□ 0.32
SMC6-206ENST00000446852 ZNF490Q9ULM2 529 aaPredicted RBP17.05■□□□□ 0.32
SMC6-206ENST00000446852 FAM234BA2RU67 622 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 TBC1D3BA6NDS4 549 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 CCDC154A6NI56 674 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 ULK1O75385 1050 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 WDR47O94967 919 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 CLDN9O95484 217 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 CYP2A7P20853 494 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 IL12RB1P42701 662 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 HNMTP50135 292 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 RPL38P63173 70 aaKnown RBP17.04■□□□□ 0.32
SMC6-206ENST00000446852 TLR1Q15399 786 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 CYP2U1Q7Z449 544 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 TRIM46Q7Z4K8 759 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 TRIM74Q86UV6 250 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 FOXJ1Q92949 421 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 USP7Q93009 1102 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 ACTR8Q9H981 624 aa17.04■□□□□ 0.32
SMC6-206ENST00000446852 ZFP14Q9HCL3 533 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms