RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 VIPP01282 170 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 CATP04040 527 aaKnown RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 C8GP07360 202 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 GIMD1P0DJR0 217 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 XRCC1P18887 633 aaPredicted RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 TGM1P22735 817 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 CCNFP41002 786 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 GPS2Q13227 327 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 BIRC2Q13490 618 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 AASDHQ4L235 1098 aaPredicted RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 HSP90B2PQ58FF3 399 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 TTMPQ5BVD1 217 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 UNC5DQ6UXZ4 953 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 LCA5Q86VQ0 697 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 SFRP1Q8N474 314 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 EID2Q8N6I1 236 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 OR5AR1Q8NGP9 310 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 STAG3L4Q8TBR4 150 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 DLG3Q92796 817 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 PTERQ96BW5 349 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 EDEM2Q9BV94 578 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 SLC12A9Q9BXP2 914 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 TRIM54Q9BYV2 358 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 IQCGQ9H095 443 aaKnown RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 TRIT1Q9H3H1 467 aaKnown RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 PARVBQ9HBI1 364 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 RXFP3Q9NSD7 469 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 NLGN3Q9NZ94 848 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 CPNE7Q9UBL6 633 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 TDRKHQ9Y2W6 561 aaKnown RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 TRIM38O00635 465 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 SLC16A5O15375 505 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 PSIP1O75475 530 aaKnown RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 C1orf105O95561 183 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 RPN2P04844 631 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 RBP1P09455 135 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 ZNF883P0CG24 379 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 MTHFD1P11586 935 aaKnown RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 KCNC1P48547 511 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 OR4D1Q15615 310 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 C6orf132Q5T0Z8 1188 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 DUS1LQ6P1R4 473 aaKnown RBP16.97■□□□□ 0.31
SGCE-206ENST00000445866 CDHR3Q6ZTQ4 885 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 SLC9B2Q86UD5 537 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 GPSM1Q86YR5 675 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 TBC1D21Q8IYX1 336 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 MAPK15Q8TD08 544 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 MAGEC3Q8TD91 643 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 SLC37A2Q8TED4 501 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 MVB12BQ9H7P6 319 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 TMEM9BQ9NQ34 198 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 TMEM216Q9P0N5 145 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 RNF112Q9ULX5 631 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 SPAG17Q6Q759 2223 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 MUC6Q6W4X9 2439 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 PABPN1LA6NDY0 278 aaKnown RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 HMGB1P1B2RPK0 211 aaPredicted RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 GLRA3O75311 464 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 HIST1H2AGP0C0S8 130 aaPredicted RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 HIST1H2ADP20671 130 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 CYP2A7P20853 494 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 NDUFS1P28331 727 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 RPIAP49247 311 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 KPNA2P52292 529 aaKnown RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 N4BP2L1Q5TBK1 243 aaPredicted RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 PRR23CQ6ZRP0 262 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 ASCL5Q7RTU5 278 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 ADAMTSL2Q86TH1 951 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 ARL14Q8N4G2 192 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 OR4C6Q8NH72 309 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 OR5K2Q8NHB8 316 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 APOPT1Q96IL0 206 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 HIST1H2AHQ96KK5 128 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 HIST1H2AJQ99878 128 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 MRPL57Q9BQC6 102 aaKnown RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 H2AFJQ9BTM1 129 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 C12orf65Q9H3J6 166 aaKnown RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 UTP6Q9NYH9 597 aaKnown RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 CPSF2Q9P2I0 782 aaKnown RBP16.96■□□□□ 0.31
SGCE-206ENST00000445866 CIDEBQ9UHD4 219 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 POLG2Q9UHN1 485 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 PDE10AQ9Y233 779 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 PCDHGB2Q9Y5G2 931 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 LAMA1P25391 3075 aa16.96■□□□□ 0.31
SGCE-206ENST00000445866 ARHGEF33A8MVX0 844 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 SIGLEC6O43699 453 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 NOBOXO60393 691 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 FOXD2O60548 495 aaPredicted RBP16.95■□□□□ 0.3
SGCE-206ENST00000445866 MAZP56270 477 aaKnown RBP16.95■□□□□ 0.3
SGCE-206ENST00000445866 ZCCHC8Q6NZY4 707 aaKnown RBP16.95■□□□□ 0.3
SGCE-206ENST00000445866 FRA10AC1Q70Z53 315 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 GPR156Q8NFN8 814 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 RHEBL1Q8TAI7 183 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 CAMK1GQ96NX5 476 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 HGH1Q9BTY7 390 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 PLLPQ9Y342 182 aa16.95■□□□□ 0.3
SGCE-206ENST00000445866 C4orf47A7E2U8 309 aa16.94■□□□□ 0.3
SGCE-206ENST00000445866 TYROBPO43914 113 aa16.94■□□□□ 0.3
SGCE-206ENST00000445866 MYF5P13349 255 aa16.94■□□□□ 0.3
SGCE-206ENST00000445866 RPA3P35244 121 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms