RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 A0A1W2PPI3 338 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 PLOD3O60568 738 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 PRAMEF11O60813 436 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 CRYAAP02489 173 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 DNTTP04053 509 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 CETPP11597 493 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 VPREB1P12018 145 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 DNASE1P24855 282 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 KRT20P35900 424 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 LIG4P49917 911 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 TERF1P54274 439 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 KIR2DS3Q14952 304 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 CBWD6Q4V339 395 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 CBWD3Q5JTY5 395 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 GRTP1Q5TC63 336 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 ANO5Q75V66 913 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 KRT74Q7RTS7 529 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 PLPPR4Q7Z2D5 763 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 LONP2Q86WA8 852 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 FAM9BQ8IZU0 186 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 CRYBG2Q8N1P7 616 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 L3MBTL4Q8NA19 623 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 KCTD6Q8NC69 237 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 DAZLQ92904 295 aaKnown RBP4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 ERP27Q96DN0 273 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 SCRN2Q96FV2 425 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 ZNF583Q96ND8 569 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 ABHD6Q9BV23 337 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 CCDC106Q9BWC9 280 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 TXLNGYQ9BZA5 131 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 GPR88Q9GZN0 384 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 DPAGT1Q9H3H5 408 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 OLAHQ9NV23 265 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 OSER1Q9NX31 292 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 ANAPC2Q9UJX6 822 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 INO80Q9ULG1 1556 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 PPIEQ9UNP9 301 aaKnown RBP4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 TET3O43151 1660 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 PRDM15P57071 1507 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 ATP7AQ04656 1500 aa4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 DHX29Q7Z478 1369 aaKnown RBP4.25□□□□□ -1.73
HMGB3P6-201ENST00000444896 FANCAO15360 1455 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 ADGRL1O94910 1474 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 SOS1Q07889 1333 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 CEP152O94986 1710 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 SPHKAPQ2M3C7 1700 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 TRAPPC8Q9Y2L5 1435 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 ELOVL7A1L3X0 281 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 SYNDIG1LA6NDD5 238 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 UBE2CO00762 179 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 XRCC3O43542 346 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 OR10H2O60403 315 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 PSMD10O75832 226 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 IGLV2-11P01706 119 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 ABCB1P08183 1280 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 ACP2P11117 423 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 GJA1P17302 382 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 HOXA1P49639 335 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 THOP1P52888 689 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 PPP5CP53041 499 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 CDK3Q00526 305 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 IL11RAQ14626 422 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 SNAPC1Q16533 368 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 RNASEH2BQ5TBB1 312 aaKnown RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 KLC3Q6P597 504 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 DGLUCYQ7Z3D6 616 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 METTL27Q8N6F8 245 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 POGLUT1Q8NBL1 392 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 PAPD5Q8NDF8 572 aaKnown RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 DMBX1Q8NFW5 382 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 CFAP61Q8NHU2 1237 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 SNRNP27Q8WVK2 155 aaKnown RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 ZNF830Q96NB3 372 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 MOV10L1Q9BXT6 1211 aaKnown RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 TXLNGQ9NUQ3 528 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 HAO2Q9NYQ3 351 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 BRD4O60885 1362 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 NOTCH4Q99466 2003 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 PLA2R1Q13018 1463 aa4.24□□□□□ -1.73
HMGB3P6-201ENST00000444896 TCF20Q9UGU0 1960 aaKnown RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 NEURL4Q96JN8 1562 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 TCRBV21S2A2A0A5A6 115 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 TMEM221A6NGB7 291 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 P2RY10O00398 339 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 SPRY1O43609 319 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 TIMM44O43615 452 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 PRKNO60260 465 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 MED24O75448 989 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 CKMT2P17540 419 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 MSH3P20585 1137 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 DCTP40126 519 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 PSMC4P43686 418 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 LMAN1P49257 510 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 HNRNPKP61978 463 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 AIMP1Q12904 312 aaKnown RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 PLA2G7Q13093 441 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 NR1D2Q14995 579 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 RBBP5Q15291 538 aaKnown RBP4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 ACCSLQ4AC99 568 aa4.23□□□□□ -1.73
HMGB3P6-201ENST00000444896 ERMARDQ5T6L9 678 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms