RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-208	ENST00000443046	KLHL25	Q9H0H3	589 aa		13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	OR52A5	Q9H2C5	316 aa		13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	RUBCNL	Q9H714	662 aa		13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	SLC22A11	Q9NSA0	550 aa		13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	UVRAG	Q9P2Y5	699 aa		13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	COPG2	Q9UBF2	871 aa		13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	GPN3	Q9UHW5	284 aa	Predicted RBP	13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	CDYL	Q9Y232	598 aa		13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.91	□□□□□ -0.18
HMGN1-208	ENST00000443046	C17orf113	A0A1B0GUU1	675 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	CCDC66	A2RUB6	948 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	C2orf74	A8MZ97	194 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	APOL1	O14791	398 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	OR2B3	O76000	313 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	PRAMEF1	O95521	474 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	SERPING1	P05155	500 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	CTSB	P07858	339 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	AKT1	P31749	480 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	GCGR	P47871	477 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	CD151	P48509	253 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	PRLHR	P49683	370 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	WASHC5	Q12768	1159 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	KRT33B	Q14525	404 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	PTPRCAP	Q14761	206 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	ZNF169	Q14929	603 aa	Predicted RBP	13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	NR1I3	Q14994	352 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	C1orf189	Q5VU69	101 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	PRAMEF13	Q5VWM6	474 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	RPUSD3	Q6P087	351 aa	Known RBP	13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	SPESP1	Q6UW49	350 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	AMIGO1	Q86WK6	493 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	C19orf47	Q8N9M1	422 aa	Known RBP	13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	OR52E1	Q8NGJ3	308 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	HM13	Q8TCT9	377 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	BLOC1S5	Q8TDH9	187 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	FERD3L	Q96RJ6	166 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	SLC6A20	Q9NP91	592 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	IFT80	Q9P2H3	777 aa	Predicted RBP	13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	LCMT1	Q9UIC8	334 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	PKP3	Q9Y446	797 aa		13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	SNRNP200	O75643	2136 aa	Known RBP	13.9	□□□□□ -0.18
HMGN1-208	ENST00000443046	LRRD1	A4D1F6	860 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	ONECUT2	O95948	504 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	ZFX	P17010	805 aa	Predicted RBP	13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	NFKB1	P19838	968 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	MMP11	P24347	488 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	PTGER4	P35408	488 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	CYP2A13	Q16696	494 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	NKAIN1	Q4KMZ8	207 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	FILIP1L	Q4L180	1135 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	AGAP7P	Q5VUJ5	663 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	FCRL6	Q6DN72	434 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	ZC3H18	Q86VM9	953 aa	Known RBP	13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	FJX1	Q86VR8	437 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	SLC25A41	Q8N5S1	370 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	FLVCR1-AS1	Q8TAF5	88 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	LURAP1	Q96LR2	239 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	AGAP4	Q96P64	663 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	FCRL5	Q96RD9	977 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	BPIFA3	Q9BQP9	254 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	TRIM56	Q9BRZ2	755 aa	Known RBP	13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	MVB12B	Q9H7P6	319 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	ACTR10	Q9NZ32	417 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	CTTNBP2NL	Q9P2B4	639 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	DHCR7	Q9UBM7	475 aa	Known RBP	13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	FAM8A1	Q9UBU6	413 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	NDOR1	Q9UHB4	597 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	FBXL4	Q9UKA2	621 aa		13.89	□□□□□ -0.19
HMGN1-208	ENST00000443046	SOCS6	O14544	535 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	STX7	O15400	261 aa	Known RBP	13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	SRP72	O76094	671 aa	Known RBP	13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	ITGAX	P20702	1163 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	XIAP	P98170	497 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	OTUD4	Q01804	1114 aa	Known RBP	13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	CDC16	Q13042	620 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	BOP1	Q14137	746 aa	Known RBP	13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	SLC9A5	Q14940	896 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	TLR1	Q15399	786 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	KRTAP21-3	Q3LHN1	58 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	SARM1	Q6SZW1	724 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	DNAJC22	Q8N4W6	341 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	PHC3	Q8NDX5	983 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	RBM41	Q96IZ5	413 aa	Known RBP	13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	OR2A14	Q96R47	310 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	XKR8	Q9H6D3	395 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	COG4	Q9H9E3	785 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	PCNX1	Q96RV3	2341 aa		13.88	□□□□□ -0.19
HMGN1-208	ENST00000443046	DNHD1	Q96M86	4753 aa		13.87	□□□□□ -0.19
HMGN1-208	ENST00000443046	CCDC78	A2IDD5	438 aa		13.87	□□□□□ -0.19
HMGN1-208	ENST00000443046	ZSCAN9	O15535	394 aa	Predicted RBP	13.87	□□□□□ -0.19
HMGN1-208	ENST00000443046	UGT2B7	P16662	529 aa		13.87	□□□□□ -0.19
HMGN1-208	ENST00000443046	PBX1	P40424	430 aa		13.87	□□□□□ -0.19
HMGN1-208	ENST00000443046	NR2C2	P49116	596 aa		13.87	□□□□□ -0.19
HMGN1-208	ENST00000443046	TDGF1P3	P51864	188 aa		13.87	□□□□□ -0.19

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