RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 SGTAO43765 313 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 FTH1P02794 183 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 RBP3P10745 1247 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 GNLYP22749 145 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 ARCN1P48444 511 aaKnown RBP13.38□□□□□ -0.27
PTPRE-203ENST00000442830 EIF3EP60228 445 aaKnown RBP13.38□□□□□ -0.27
PTPRE-203ENST00000442830 OTUD4Q01804 1114 aaKnown RBP13.38□□□□□ -0.27
PTPRE-203ENST00000442830 CACNG1Q06432 222 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 ABRQ12979 859 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 SSPNQ14714 243 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 LLGL1Q15334 1064 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 P3H1Q32P28 736 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 FAM182AQ5T1J6 154 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 JMJD6Q6NYC1 403 aaPredicted RBP13.38□□□□□ -0.27
PTPRE-203ENST00000442830 SPESP1Q6UW49 350 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 FAM198BQ6UWH4 519 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 KLHDC8BQ8IXV7 354 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 SLC38A9Q8NBW4 561 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 CLEC1AQ8NC01 280 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 OR52E1Q8NGJ3 308 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 OR1L3Q8NH93 324 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 ACTL9Q8TC94 416 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 STYXQ8WUJ0 223 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 TM9SF4Q92544 642 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 TFGQ92734 400 aaPredicted RBP13.38□□□□□ -0.27
PTPRE-203ENST00000442830 NACC2Q96BF6 587 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 TRAPPC9Q96Q05 1148 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 RUFY1Q96T51 708 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 TTC1Q99614 292 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 HEMGNQ9BXL5 484 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 OSBPL8Q9BZF1 889 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 TSPY26PQ9H489 355 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 PCDHA13Q9Y5I0 950 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 NOTCH2Q04721 2471 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 GOLGA6L9A6NEM1 432 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 PEX12O00623 359 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 ST6GAL1P15907 406 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 MC4RP32245 332 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 CA5AP35218 305 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 NSG1P42857 185 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 RWDD2BP57060 319 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 CHAF1BQ13112 559 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 TBX2Q13207 712 aaPredicted RBP13.37□□□□□ -0.27
PTPRE-203ENST00000442830 BOP1Q14137 746 aaKnown RBP13.37□□□□□ -0.27
PTPRE-203ENST00000442830 ITIH4Q14624 930 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 PTPRCAPQ14761 206 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 INPP5JQ15735 1006 aaPredicted RBP13.37□□□□□ -0.27
PTPRE-203ENST00000442830 NADK2Q4G0N4 442 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 ZRANB3Q5FWF4 1079 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 ZNF789Q5FWF6 425 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 LYPLAL1Q5VWZ2 237 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 TLDC1Q6P9B6 456 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 ARHGEF18Q6ZSZ5 1173 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 IQCKQ8N0W5 287 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 C19orf47Q8N9M1 422 aaKnown RBP13.37□□□□□ -0.27
PTPRE-203ENST00000442830 FDCSPQ8NFU4 85 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 OR13C4Q8NGS5 318 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 GORASP1Q9BQQ3 440 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 AP1M1Q9BXS5 423 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 LRRC40Q9H9A6 602 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 NLE1Q9NVX2 485 aaPredicted RBP13.37□□□□□ -0.27
PTPRE-203ENST00000442830 ACTR10Q9NZ32 417 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 OR6C2Q9NZP2 312 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 PLEKHB1Q9UF11 243 aaPredicted RBP13.37□□□□□ -0.27
PTPRE-203ENST00000442830 NDOR1Q9UHB4 597 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 NUP210LQ5VU65 1888 aa13.37□□□□□ -0.27
PTPRE-203ENST00000442830 FER1L5A0AVI2 2057 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 ZNF185O15231 689 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 ZNF749O43361 778 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 LDB2O43679 373 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 GAS8O95995 478 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
PTPRE-203ENST00000442830 CAPN1P07384 714 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 FOLR3P41439 243 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 UQCRFS1P47985 274 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 MARCKSL1P49006 195 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 LMAN1P49257 510 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 MSLNQ13421 630 aaPredicted RBP13.36□□□□□ -0.27
PTPRE-203ENST00000442830 PARP6Q2NL67 630 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 ZNF658BQ4V348 819 aaPredicted RBP13.36□□□□□ -0.27
PTPRE-203ENST00000442830 SLC6A19Q695T7 634 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 RHBDD2Q6NTF9 364 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 PACS1Q6VY07 963 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 TAS2R42Q7RTR8 314 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 LINC00523Q86TU6 105 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 SERPINA9Q86WD7 417 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 TBC1D21Q8IYX1 336 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 ADGRF3Q8IZF5 1079 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 ZBTB2Q8N680 514 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 LILRA3Q8N6C8 439 aaPredicted RBP13.36□□□□□ -0.27
PTPRE-203ENST00000442830 COG1Q8WTW3 980 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 KRT35Q92764 455 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 VPS50Q96JG6 964 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 APOL2Q9BQE5 337 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 HGH1Q9BTY7 390 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 TSSK1BQ9BXA7 367 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 TXLNGQ9NUQ3 528 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 UNC79Q9P2D8 2635 aa13.36□□□□□ -0.27
PTPRE-203ENST00000442830 TEX15Q9BXT5 2789 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms