RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 MLPHQ9BV36 600 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 BRD8Q9H0E9 1235 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 RAB17Q9H0T7 212 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 MAGEH1Q9H213 219 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 RETREG1Q9H6L5 497 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 RBM22Q9NW64 420 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 DNAJC28Q9NX36 388 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 FOXJ2Q9P0K8 574 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 AKAP7Q9P0M2 348 aaPredicted RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 WHRNQ9P202 907 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 PAK5Q9P286 719 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 SERGEFQ9UGK8 458 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 VPS51Q9UID3 782 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 NFU1Q9UMS0 254 aa4.74□□□□□ -1.65
PTPN4-206ENST00000441089 UTP11Q9Y3A2 253 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 PRRC2AP48634 2157 aaKnown RBP4.74□□□□□ -1.65
PTPN4-206ENST00000441089 K7ERQ8 282 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 SLC7A4O43246 635 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 BANF1O75531 89 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF821O75541 412 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 MT-CO1P00395 513 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 MMP2P08253 660 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PRKAR1AP10644 381 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PABPC1P11940 636 aaKnown RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 CCNB1P14635 433 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ITIH1P19827 911 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 NR1D1P20393 614 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 C5AR1P21730 350 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ETFBP38117 255 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ADCY8P40145 1251 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 GRIA1P42261 906 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 MAGEA6P43360 314 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 RECQLP46063 649 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PLK1P53350 603 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PLTPP55058 493 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 MAXP61244 160 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PPP2CBP62714 309 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PPP2CAP67775 309 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 BASP1P80723 227 aaKnown RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 DSC2Q02487 901 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 LAPTM5Q13571 262 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 SEMA5AQ13591 1074 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 CUL1Q13616 776 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 CDH18Q13634 790 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 SPARCL1Q14515 664 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 INPP5JQ15735 1006 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 DEFB109BQ30KR1 87 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 HNRNPA1L2Q32P51 320 aaKnown RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PITRM1Q5JRX3 1037 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 BEND6Q5SZJ8 279 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 KCTD11Q693B1 232 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 TIGD7Q6NT04 549 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ESRP1Q6NXG1 681 aaKnown RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PID1Q7Z2X4 250 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ADIPOR2Q86V24 386 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 TRIM69Q86WT6 500 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 LSRQ86X29 649 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 LRRC49Q8IUZ0 686 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 IFT20Q8IY31 132 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 CACNA2D3Q8IZS8 1091 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 AHI1Q8N157 1196 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF557Q8N988 423 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 DCAF4L2Q8NA75 395 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 SLC16A11Q8NCK7 471 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF548Q8NEK5 533 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ARRDC2Q8TBH0 407 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 CCHCR1Q8TD31 782 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 JPH3Q8WXH2 748 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PTPRN2Q92932 1015 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 TADA1Q96BN2 335 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 LRRC45Q96CN5 670 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 SNF8Q96H20 258 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 OXNAD1Q96HP4 312 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 TEKT5Q96M29 485 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 GDAP1L1Q96MZ0 367 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 AGAP3Q96P47 875 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 FCRL5Q96RD9 977 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 MGME1Q9BQP7 344 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 BOCQ9BWV1 1114 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 CDADC1Q9BWV3 514 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 TXLNGYQ9BZA5 131 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 GBA3Q9H227 469 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 GLOD4Q9HC38 313 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 NT5MQ9NPB1 228 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 FAM114A2Q9NRY5 505 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 AP5S1Q9NUS5 200 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ABCB8Q9NUT2 735 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 KLHL8Q9P2G9 620 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 LHX3Q9UBR4 397 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 RSPH14Q9UHP6 348 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 FEZ2Q9UHY8 353 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 GGA2Q9UJY4 613 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PADI4Q9UM07 663 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 PPT2Q9UMR5 302 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ATP8A1Q9Y2Q0 1164 aa4.73□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF469Q96JG9 3925 aaPredicted RBP4.73□□□□□ -1.65
PTPN4-206ENST00000441089 TYW5A2RUC4 315 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 CCDC151A5D8V7 595 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TMEM200CA6NKL6 621 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms