RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CPZQ66K79 652 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 LCN10Q6JVE6 187 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 AADACL2Q6P093 401 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 HOOK3Q86VS8 718 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 SYTL1Q8IYJ3 562 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 ZNF451Q9Y4E5 1061 aa20.11■□□□□ 0.81
CPNE1-219ENST00000440240 SPTAN1Q13813 2472 aaKnown RBP20.11■□□□□ 0.81
CPNE1-219ENST00000440240 E7EQ34 232 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 TMEM63AO94886 807 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 AGXTP21549 392 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 NSG1P42857 185 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 PTGIRP43119 386 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 LMAN1P49257 510 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 ITGA1P56199 1179 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 P3H1Q32P28 736 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 MED25Q71SY5 747 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 HPS6Q86YV9 775 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 GPR135Q8IZ08 494 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 ADGRF3Q8IZF5 1079 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 TMEM102Q8N9M5 508 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-219ENST00000440240 LRRC57Q8N9N7 239 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 FAM71DQ8N9W8 422 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 GALNT11Q8NCW6 608 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 CPT1CQ8TCG5 803 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.1■□□□□ 0.812e-6■■■■■ 26.8
CPNE1-219ENST00000440240 ACTR10Q9NZ32 417 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 SMARCAL1Q9NZC9 954 aa20.1■□□□□ 0.81
CPNE1-219ENST00000440240 PRRC2CQ9Y520 2896 aaKnown RBP20.09■□□□□ 0.81
CPNE1-219ENST00000440240 LIN7AO14910 233 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-219ENST00000440240 CEACAM4O75871 244 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 METTL18O95568 372 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 CAPN1P07384 714 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 VAV2P52735 878 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 POU6F1Q14863 301 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 PIANPQ8IYJ0 282 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 UBL4BQ8N7F7 174 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 N4BP2L2Q92802 583 aaPredicted RBP20.09■□□□□ 0.81
CPNE1-219ENST00000440240 C17orf62Q9BQA9 187 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 HGH1Q9BTY7 390 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 DHRS4Q9BTZ2 278 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 LACRTQ9GZZ8 138 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 POLG2Q9UHN1 485 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 AMFRQ9UKV5 643 aa20.09■□□□□ 0.81
CPNE1-219ENST00000440240 MED13Q9UHV7 2174 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 SPTBN1Q01082 2364 aaKnown RBP20.08■□□□□ 0.81
CPNE1-219ENST00000440240 C9J4A7 227 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 ZNF749O43361 778 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 FTH1P02794 183 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 PSMA3P25788 255 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 SHMT2P34897 504 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 RRADP55042 308 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 PLOD1Q02809 727 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-219ENST00000440240 ITIH4Q14624 930 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 NCF4Q15080 339 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 DBN1Q16643 649 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 SPESP1Q6UW49 350 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 CDHR3Q6ZTQ4 885 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 PEX26Q7Z412 305 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 LINC00523Q86TU6 105 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 SYCE1Q8N0S2 351 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 TCTN2Q96GX1 697 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 PSMG3-AS1Q96PY0 264 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 KLHL25Q9H0H3 589 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 XKR8Q9H6D3 395 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 ASF1AQ9Y294 204 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 PADI2Q9Y2J8 665 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 REXO2Q9Y3B8 237 aaKnown RBP20.08■□□□□ 0.81
CPNE1-219ENST00000440240 AP1M2Q9Y6Q5 423 aa20.08■□□□□ 0.81
CPNE1-219ENST00000440240 GRID2IPA4D2P6 1211 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 MROH6A6NGR9 719 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 MIF4GDA9UHW6 222 aaKnown RBP20.07■□□□□ 0.8
CPNE1-219ENST00000440240 DPM1O60762 260 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 AP2A1O95782 977 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 CD63P08962 238 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 PRSS56P0CW18 603 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 PVRP15151 417 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 PTCHD3Q3KNS1 767 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 NADK2Q4G0N4 442 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 FAM198BQ6UWH4 519 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 UNC5AQ6ZN44 842 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 TBC1D21Q8IYX1 336 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 MRFAP1L1Q96HT8 127 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 NRTNQ99748 197 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 CHRNA10Q9GZZ6 450 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 LRRC4CQ9HCJ2 640 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 MAP4K5Q9Y4K4 846 aa20.07■□□□□ 0.8
CPNE1-219ENST00000440240 SPENQ96T58 3664 aaKnown RBP20.07■□□□□ 0.8
CPNE1-219ENST00000440240 F8W8V4 182 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 ZNF185O15231 689 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 KDM1AO60341 852 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 GAS8O95995 478 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 MSNP26038 577 aaKnown RBP20.06■□□□□ 0.8
CPNE1-219ENST00000440240 VARSP26640 1264 aaKnown RBP20.06■□□□□ 0.8
CPNE1-219ENST00000440240 ACADLP28330 430 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 ZNF75DP51815 510 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 PACS1Q6VY07 963 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 RAD9BQ6WBX8 426 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 KIAA1328Q86T90 577 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 RAB43Q86YS6 212 aa20.06■□□□□ 0.8
CPNE1-219ENST00000440240 ZBTB2Q8N680 514 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms