RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 OR4D9Q8NGE8 314 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 GSDMBQ8TAX9 411 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 KCNE4Q8WWG9 221 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 RSC1A1Q92681 617 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 EPB41L4BQ9H329 900 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 UCK1Q9HA47 277 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 C20orf96Q9NUD7 363 aaPredicted RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 KLHL3Q9UH77 587 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 GNPTGQ9UJJ9 305 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 HELZ2Q9BYK8 2649 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 TEX51A0A1B0GUA7 166 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 F8W8V4 182 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 IFRD1O00458 451 aaPredicted RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 LIN7AO14910 233 aaPredicted RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 ACSL3O95573 720 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 OGNP20774 298 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 UCNP55089 124 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 GFERP55789 205 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 EIF3IQ13347 325 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 THOC5Q13769 683 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 FRG1Q14331 258 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 C16orf72Q14CZ0 275 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 UAP1Q16222 522 aaPredicted RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 CLPPQ16740 277 aaPredicted RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 LONRF1Q17RB8 773 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 RNF187Q5TA31 235 aaPredicted RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 CAPRIN2Q6IMN6 1127 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 ZNF449Q6P9G9 518 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 FBXO38Q6PIJ6 1188 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 CAPN12Q6ZSI9 719 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 CYS1Q717R9 158 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 RAB11FIP2Q7L804 512 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 DENND6AQ8IWF6 608 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 RBM12BQ8IXT5 1001 aaKnown RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 UBLCP1Q8WVY7 318 aaPredicted RBP17.24■□□□□ 0.35
CCDC188-201ENST00000439765 LPGAT1Q92604 370 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 TSSK1BQ9BXA7 367 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 DPH1Q9BZG8 443 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 P2RY12Q9H244 342 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 CRYL1Q9Y2S2 319 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 ATMQ13315 3056 aa17.24■□□□□ 0.35
CCDC188-201ENST00000439765 KALRNO60229 2985 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 TMX2-CTNND1H3BSU7 103 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 ITGA2BP08514 1039 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 THRAP10827 490 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 AMD1P17707 334 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 CCR7P32248 378 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 PHBP35232 272 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 HSD17B3P37058 310 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 SLC1A2P43004 574 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 CAPZBP47756 277 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 LIMK2P53671 638 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 RPA4Q13156 261 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 KRT33BQ14525 404 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 CTSL3PQ5NE16 218 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 KCNMB4Q86W47 210 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 LSM14AQ8ND56 463 aaKnown RBP17.23■□□□□ 0.35
CCDC188-201ENST00000439765 TMEM159Q96B96 161 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 FAM136AQ96C01 138 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 FUT8Q9BYC5 575 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 MOCS1Q9NZB8 636 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 LOXL2Q9Y4K0 774 aa17.23■□□□□ 0.35
CCDC188-201ENST00000439765 TCRBV9S1A1TA0A576 114 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 A8MU76 341 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 TK2O00142 265 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 PLD2O14939 933 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 ATXN7O15265 892 aaPredicted RBP17.22■□□□□ 0.35
CCDC188-201ENST00000439765 ABHD2P08910 425 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 RPS3P23396 243 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC188-201ENST00000439765 FMO4P31512 558 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 HSPA14Q0VDF9 509 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 CTBP1Q13363 440 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 SQSTM1Q13501 440 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 SLC29A2Q14542 456 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 ZNF789Q5FWF6 425 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 BROXQ5VW32 411 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 TMEM71Q6P5X7 295 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 TRMT10BQ6PF06 316 aaKnown RBP17.22■□□□□ 0.35
CCDC188-201ENST00000439765 WDR74Q6RFH5 385 aaPredicted RBP17.22■□□□□ 0.35
CCDC188-201ENST00000439765 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 FBXO39Q8N4B4 442 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 NAF1Q96HR8 494 aaKnown RBP17.22■□□□□ 0.35
CCDC188-201ENST00000439765 BIRC8Q96P09 236 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 CMKLR1Q99788 373 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 DPYSL5Q9BPU6 564 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 HGH1Q9BTY7 390 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 EPB41L1Q9H4G0 881 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 KIR3DX1Q9H7L2 352 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 FBXO6Q9NRD1 293 aaPredicted RBP17.22■□□□□ 0.35
CCDC188-201ENST00000439765 PISDQ9UG56 409 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 SLC24A2Q9UI40 661 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 HEBP2Q9Y5Z4 205 aa17.22■□□□□ 0.35
CCDC188-201ENST00000439765 GCN1Q92616 2671 aaKnown RBP17.21■□□□□ 0.35
CCDC188-201ENST00000439765 SDK2Q58EX2 2172 aa17.21■□□□□ 0.35
CCDC188-201ENST00000439765 SLC5A10A0PJK1 596 aa17.21■□□□□ 0.35
CCDC188-201ENST00000439765 PFDN6O15212 129 aa17.21■□□□□ 0.35
CCDC188-201ENST00000439765 NIPSNAP2O75323 286 aa17.21■□□□□ 0.35
CCDC188-201ENST00000439765 JMJD7P0C870 316 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms