RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 TMEM115Q12893 351 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 TRAP1Q12931 704 aaKnown RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 TRIM25Q14258 630 aaKnown RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 ABRAXAS2Q15018 415 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 NR6A1Q15406 480 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 ZXDCQ2QGD7 858 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 SPATS1Q496A3 300 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 VPS26BQ4G0F5 336 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 BCL7AQ4VC05 210 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 SAMD4BQ5PRF9 694 aaKnown RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 ZNF648Q5T619 568 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 ERN2Q76MJ5 926 aaKnown RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 TRIM46Q7Z4K8 759 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 YAF2Q8IY57 180 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 MINDY1Q8N5J2 469 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 BEND7Q8N7W2 519 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 HIPK4Q8NE63 616 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 SKA2Q8WVK7 121 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 SUSD6Q92537 303 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 USP7Q93009 1102 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 NUS1Q96E22 293 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 SPDL1Q96EA4 605 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 NAF1Q96HR8 494 aaKnown RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 RSRC1Q96IZ7 334 aaKnown RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 HOPXQ9BPY8 73 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 CCM2Q9BSQ5 444 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 C1orf50Q9BV19 199 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 HDAC8Q9BY41 377 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 SLC28A3Q9HAS3 691 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 GID8Q9NWU2 228 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 MAP10Q9P2G4 905 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 ABCD2Q9UBJ2 740 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 CNOT6Q9ULM6 557 aaKnown RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 PSMD13Q9UNM6 376 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 RNF11Q9Y3C5 154 aa11.51□□□□□ -0.57
SMAD3-202ENST00000439724 ZFC3H1O60293 1989 aaKnown RBP11.51□□□□□ -0.57
SMAD3-202ENST00000439724 GRXCR2A6NFK2 248 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 FXYD1O00168 92 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 MANBAO00462 879 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 CASQ2O14958 399 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 LINC01565O15544 149 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 RGS14O43566 566 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 PSIP1O75475 530 aaKnown RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 RECQL5O94762 991 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 CLDN9O95484 217 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 C6P13671 934 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 IL12RB1P42701 662 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 UFM1P61960 85 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 MAD2L1Q13257 205 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 GRM2Q14416 872 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 AP5B1Q2VPB7 878 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 PTCHD3Q3KNS1 767 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ZNF658BQ4V348 819 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 SYTL3Q4VX76 610 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 NAIF1Q69YI7 327 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 LAYNQ6UX15 382 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 GALNT13Q8IUC8 556 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 RNF148Q8N7C7 305 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ST13P5Q8NFI4 369 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 BHLHE22Q8NFJ8 381 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 RAB7BQ96AH8 199 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 TMEM159Q96B96 161 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 FBXL8Q96CD0 374 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 MAGEB10Q96LZ2 347 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 MYADMQ96S97 322 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 P2RY13Q9BPV8 354 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 PLA2G2FQ9BZM2 168 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ZCCHC2Q9C0B9 1178 aaKnown RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 PRSS16Q9NQE7 514 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 DYRK4Q9NR20 520 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 DNAJC11Q9NVH1 559 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ASIC5Q9NY37 505 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 KLQ9UEF7 1012 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 HCN2Q9UL51 889 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 MKI67P46013 3256 aaKnown RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 KCNE1BA0A087WTH5 132 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 PRORSD1PA6NEY8 169 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 TMEM202A6NGA9 273 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ARHGEF33A8MVX0 844 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 C9JVG2 144 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 IFRD1O00458 451 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 FFAR3O14843 346 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ANKRD28O15084 1053 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 INPP4BO15327 924 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 GPR42O15529 346 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ULK1O75385 1050 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 KAT7O95251 611 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 KRT6AP02538 564 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 KRT6BP04259 564 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 PSMC3P17980 439 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 GRIA2P42262 883 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 KRT6CP48668 564 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 POLR2JP52435 117 aaKnown RBP11.5□□□□□ -0.57
SMAD3-202ENST00000439724 SLC7A2P52569 658 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 PRKG2Q13237 762 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 CYP20A1Q6UW02 462 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 ZFAND4Q86XD8 727 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 KLHDC8AQ8IYD2 350 aa11.5□□□□□ -0.57
SMAD3-202ENST00000439724 SLC22A15Q8IZD6 547 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms