RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 THP07101 528 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 SPNP16150 400 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 MRPL19P49406 292 aaKnown RBP8.41□□□□□ -1.06
HPS4-206ENST00000439453 COPZ1P61923 177 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 CDK5R2Q13319 367 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 SELPLGQ14242 412 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.41□□□□□ -1.06
HPS4-206ENST00000439453 TAS2R42Q7RTR8 314 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 LDB1Q86U70 411 aaPredicted RBP8.41□□□□□ -1.06
HPS4-206ENST00000439453 CNIH3Q8TBE1 160 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 CEP44Q9C0F1 390 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 TCF20Q9UGU0 1960 aaKnown RBP8.41□□□□□ -1.06
HPS4-206ENST00000439453 A0A1B0GTL3 188 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 HS6ST1O60243 411 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 CST1P01037 141 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 PRR35P0CG20 571 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 CD1DP15813 335 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 NPR3P17342 541 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 CCNCP24863 283 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 LTBRP36941 435 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 SEPHS1P49903 392 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 LAPTM5Q13571 262 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 ZNF181Q2M3W8 571 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 TCEAL5Q5H9L2 206 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 SLX4IPQ5VYV7 408 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 CILP2Q8IUL8 1156 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 SVOPLQ8N434 492 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 SVOPQ8N4V2 548 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 FAM86B1Q8N7N1 296 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 MAFAQ8NHW3 353 aaPredicted RBP8.41□□□□□ -1.06
HPS4-206ENST00000439453 MCFD2Q8NI22 146 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 AUTS2Q8WXX7 1259 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 ZNF566Q969W8 418 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 B3GALT6Q96L58 329 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 UGT2B28Q9BY64 529 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 ULBP1Q9BZM6 244 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 TIMM22Q9Y584 194 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 PCDHGA10Q9Y5H3 936 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 YJEFN3A6XGL0 299 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 NOTOA8MTQ0 251 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 GNGT2O14610 69 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 TBX1O43435 398 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 NPPAP01160 153 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 SLC4A1P02730 911 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 GGT1P19440 569 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 PSMB9P28065 219 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 IL12AP29459 219 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 CD6P30203 668 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 RYKP34925 604 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 MTPNP58546 118 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 ZNF33AQ06730 810 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 VAC14Q08AM6 782 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 OR4D1Q15615 310 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 STEAP3Q658P3 488 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 SPESP1Q6UW49 350 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 ENPP6Q6UWR7 440 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 RANBP10Q6VN20 620 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 HEATR4Q86WZ0 1026 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 PLD3Q8IV08 490 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 ATPAF2Q8N5M1 289 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 B3GALNT2Q8NCR0 500 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 FRS2Q8WU20 508 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 KCTD13Q8WZ19 329 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 MRGPRX2Q96LB1 330 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 PPM1MQ96MI6 270 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 EMILIN2Q9BXX0 1053 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 BRINP2Q9C0B6 783 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 ANKHQ9HCJ1 492 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 OSGIN1Q9UJX0 560 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 C3orf18Q9UK00 162 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 PNMA8BQ9ULN7 279 aaPredicted RBP8.41□□□□□ -1.06
HPS4-206ENST00000439453 IRAK3Q9Y616 596 aa8.41□□□□□ -1.06
HPS4-206ENST00000439453 FAM234BA2RU67 622 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 TNFRSF10AO00220 468 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 RAD51BO15315 384 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 LINC01565O15544 149 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 ANGPTL1O95841 491 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 PPM1AP35813 382 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 IL5RAQ01344 420 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 DGCR6Q14129 220 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 CLCA4Q14CN2 919 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 NPTX1Q15818 432 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 NKG7Q16617 165 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 COLEC12Q5KU26 742 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 SYT6Q5T7P8 510 aaPredicted RBP8.4□□□□□ -1.06
HPS4-206ENST00000439453 KIAA0319Q5VV43 1072 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 RSBN1Q5VWQ0 802 aaPredicted RBP8.4□□□□□ -1.06
HPS4-206ENST00000439453 CCDC81Q6ZN84 652 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 APPL2Q8NEU8 664 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 FBXO30Q8TB52 745 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 HASPINQ8TF76 798 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 TP53INP1Q96A56 240 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 TNIP3Q96KP6 325 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 COLEC11Q9BWP8 271 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 TKTL2Q9H0I9 626 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 WDCPQ9H6R7 721 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 SMPD4Q9NXE4 827 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 PRG3Q9Y2Y8 225 aaPredicted RBP8.4□□□□□ -1.06
HPS4-206ENST00000439453 UGT2A1Q9Y4X1 527 aa8.4□□□□□ -1.06
HPS4-206ENST00000439453 FAM172BPA6NC97 362 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms