RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 MAGEB10Q96LZ2 347 aaPredicted RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 MCEEQ96PE7 176 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 KCTD15Q96SI1 283 aaPredicted RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 POLR1EQ9GZS1 481 aaKnown RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 NT5MQ9NPB1 228 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 RAD18Q9NS91 495 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 SEPT11Q9NVA2 429 aaKnown RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 NDOR1Q9UHB4 597 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 CHKBQ9Y259 395 aa10.8□□□□□ -0.68
CSTF3-203ENST00000438862 NCOA6Q14686 2063 aaPredicted RBP10.8□□□□□ -0.68
CSTF3-203ENST00000438862 ZNF469Q96JG9 3925 aaPredicted RBP10.79□□□□□ -0.68
CSTF3-203ENST00000438862 TCRBV5S1A1TA0A578 114 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 CCDC66A2RUB6 948 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 OR6C74A6NCV1 312 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 BTNL10A8MVZ5 291 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 PJA2O43164 708 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 UNC5CO95185 931 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 PRLP01236 227 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 CCDC175P0C221 793 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 TMEM253P0C7T8 217 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 FOSL1P15407 271 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 KLK2P20151 261 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 MAGEA1P43355 309 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 DCDP81605 110 aaKnown RBP10.79□□□□□ -0.68
CSTF3-203ENST00000438862 ADORA2A-AS1P86434 159 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 DMPKQ09013 629 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 PRKAA1Q13131 559 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 DPYSQ14117 519 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 ZFYVE27Q5T4F4 411 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 DNAJC24Q6P3W2 148 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 DCUN1D2Q6PH85 259 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 ISLR2Q6UXK2 745 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 MON1BQ7L1V2 547 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 C11orf96Q7Z7L8 435 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 PSTKQ8IV42 348 aaKnown RBP10.79□□□□□ -0.68
CSTF3-203ENST00000438862 GPR135Q8IZ08 494 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 TEX26Q8N6G2 289 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 ACBD4Q8NC06 268 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 DNAJB8Q8NHS0 232 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 TRIM44Q96DX7 344 aaPredicted RBP10.79□□□□□ -0.68
CSTF3-203ENST00000438862 NUP85Q9BW27 656 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 AP1M1Q9BXS5 423 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 TDRD1Q9BXT4 1180 aaKnown RBP10.79□□□□□ -0.68
CSTF3-203ENST00000438862 LHPPQ9H008 270 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 CXXC4Q9H2H0 198 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 ZWILCHQ9H900 591 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 MRPL47Q9HD33 250 aaKnown RBP10.79□□□□□ -0.68
CSTF3-203ENST00000438862 SLC6A20Q9NP91 592 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 HAUS2Q9NVX0 235 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 DTLQ9NZJ0 730 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 CWC15Q9P013 229 aaKnown RBP10.79□□□□□ -0.68
CSTF3-203ENST00000438862 IFT80Q9P2H3 777 aaPredicted RBP10.79□□□□□ -0.68
CSTF3-203ENST00000438862 SEC14L3Q9UDX4 400 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 LCMT1Q9UIC8 334 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 PCDHA13Q9Y5I0 950 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 AP1M2Q9Y6Q5 423 aa10.79□□□□□ -0.68
CSTF3-203ENST00000438862 A0A0A6YYK5 440 aaPredicted RBP10.78□□□□□ -0.68
CSTF3-203ENST00000438862 ANKRD66B4E2M5 251 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 MATN2O00339 956 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 ZSCAN12O43309 604 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 CRYABP02511 175 aaKnown RBP10.78□□□□□ -0.68
CSTF3-203ENST00000438862 CBSLP0DN79 551 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 CBSP35520 551 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 HADHBP55084 474 aaKnown RBP10.78□□□□□ -0.68
CSTF3-203ENST00000438862 DCDC1P59894 354 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 MFAP5Q13361 173 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 GTF2H3Q13889 308 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 ALG1LQ6GMV1 187 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 PLEKHA7Q6IQ23 1121 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 RHBDD2Q6NTF9 364 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 FBXO38Q6PIJ6 1188 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 TMCO3Q6UWJ1 677 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 AMZ2Q86W34 360 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 TRAPPC5Q8IUR0 188 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 LRRC49Q8IUZ0 686 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 RHOT2Q8IXI1 618 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 ATPAF2Q8N5M1 289 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 GPR26Q8NDV2 337 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 CATSPER1Q8NEC5 780 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 PROKR1Q8TCW9 393 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 CTNNBL1Q8WYA6 563 aaPredicted RBP10.78□□□□□ -0.68
CSTF3-203ENST00000438862 VPS50Q96JG6 964 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 TAAR6Q96RI8 345 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 FOXC2Q99958 501 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 TREX2Q9BQ50 279 aaPredicted RBP10.78□□□□□ -0.68
CSTF3-203ENST00000438862 SNRNP25Q9BV90 132 aaKnown RBP10.78□□□□□ -0.68
CSTF3-203ENST00000438862 KCNF1Q9H3M0 494 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 PCDH9Q9HC56 1237 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 SPTLC3Q9NUV7 552 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 PARVAQ9NVD7 372 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 ABI3Q9P2A4 366 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 UVRAGQ9P2Y5 699 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 NFKBIL1Q9UBC1 381 aaPredicted RBP10.78□□□□□ -0.68
CSTF3-203ENST00000438862 PCDHGB6Q9Y5F9 930 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 DNMT3AQ9Y6K1 912 aaPredicted RBP10.78□□□□□ -0.68
CSTF3-203ENST00000438862 SCINQ9Y6U3 715 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 CACNA1CQ13936 2221 aa10.78□□□□□ -0.68
CSTF3-203ENST00000438862 TRAV17A0A0B4J275 112 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms