RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SIAH3Q8IW03 269 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 MFN1Q8IWA4 741 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 OFCC1Q8IZS5 231 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 SYCE1Q8N0S2 351 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 DNAAF3Q8N9W5 541 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 LEMD2Q8NC56 503 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 HJURPQ8NCD3 748 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 TMEM185AQ8NFB2 350 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR56B1Q8NGI3 324 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR10S1Q8NGN2 331 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR10T2Q8NGX3 314 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 MBD3L2Q8NHZ7 208 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 NCOA7Q8NI08 942 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 C9orf43Q8TAL5 461 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 FAM110DQ8TAY7 271 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 MYCBPAPQ8TBZ2 947 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 GPT2Q8TD30 523 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATP8B4Q8TF62 1192 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 NSMCE1Q8WV22 266 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 FAM71F1Q96KD3 344 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 Q96MF0 132 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 LRFN5Q96NI6 719 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF607Q96SK3 696 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 CDRT15Q96T59 188 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 PCDHB18PQ96TA0 734 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 MYOCQ99972 504 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC26A1Q9H2B4 701 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 MINDY3Q9H8M7 445 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 ANKZF1Q9H8Y5 726 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 PPANQ9NQ55 473 aaKnown RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 FARSBQ9NSD9 589 aaKnown RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 MRPS18AQ9NVS2 196 aaKnown RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 TRNAU1APQ9NX07 287 aaKnown RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 DLGAP2Q9P1A6 1054 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 DKK2Q9UBU2 259 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 HESX1Q9UBX0 185 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 CNOT8Q9UFF9 292 aaKnown RBP3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 CD300AQ9UGN4 299 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 TSPAN16Q9UKR8 245 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 RAB21Q9UL25 225 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 USP22Q9UPT9 525 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 SHOC2Q9UQ13 582 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 CMAHPQ9Y471 501 aa3.56□□□□□ -1.84
HMGB1P12-201ENST00000438594 SBNO1A3KN83 1393 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATRNL1Q5VV63 1379 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CYP3A7-CYP3A51PA0A087WV96 503 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 A0A1W2PPW3 197 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 C17orf102A2RUQ5 167 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ANKDD1BA6NHY2 528 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 LRRC3CA6NJW4 275 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR6C75A6NL08 312 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 M0QZQ0 153 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 AGPSO00116 658 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ALOX15BO15296 676 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CTIFO43310 598 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 HCRTR2O43614 444 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 KLK8O60259 260 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 OPN1LWP04000 364 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PGK2P07205 417 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 RPSAP08865 295 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PABPC4LP0CB38 370 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR8G3PP0DMU2 310 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CALCBP10092 127 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 EGR2P11161 476 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PRPS2P11908 318 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 HGFP14210 728 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ARSAP15289 507 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 TCF4P15884 667 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 GNAZP19086 355 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CD72P21854 359 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CYP3A7P24462 503 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ANXA13P27216 316 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 HOXA6P31267 233 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 EVI2BP34910 448 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ALDH1A3P47895 512 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 LEPRP48357 1165 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ENTPD1P49961 510 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 HTR6P50406 440 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 GATMP50440 423 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CRYBB1P53674 252 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 GALCP54803 685 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLDN8P56748 225 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 RPL15P61313 204 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 GPC5P78333 572 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 SHC2P98077 582 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ECT2LQ008S8 904 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 GALK2Q01415 458 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 OTUD4Q01804 1114 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 GOLGA8FQ08AF8 430 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ASPHQ12797 758 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 TCF15Q12870 199 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF177Q13360 481 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 MAB21L1Q13394 359 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PDK4Q16654 411 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 P3H1Q32P28 736 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PTCHD3Q3KNS1 767 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 IQCCQ4KMZ1 466 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 MPPE1Q53F39 396 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 TMEM196Q5HYL7 178 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms