RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SGK2Q9HBY8 427 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SDR39U1Q9NRG7 319 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 MRPL17Q9NRX2 175 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 INTS7Q9NVH2 962 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 NLE1Q9NVX2 485 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 KLHL28Q9NXS3 571 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 STMN3Q9NZ72 180 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 MTRRQ9UBK8 725 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ADAM30Q9UKF2 790 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 Q9Y3F1 56 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TCRBV3S1A0A5B6 114 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ANKDD1BA6NHY2 528 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 SLC38A8A6NNN8 435 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 EFCAB9A8MZ26 197 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 LOC110117498-PIK3R3F6TDL0 507 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 IDH3BO43837 385 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 FOXD2O60548 495 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 EEDO75530 441 aaKnown RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MATN4O95460 622 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TFPTP0C1Z6 253 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CDK4P11802 303 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CD36P16671 472 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PRKACGP22612 351 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 FLT3LGP49771 235 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 NFKB2Q00653 900 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 DMPKQ09013 629 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MYBPC3Q14896 1274 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 OR4D1Q15615 310 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CARTPTQ16568 116 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 KCTD11Q693B1 232 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 OR2T5Q6IEZ7 315 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MAMDC4Q6UXC1 1216 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 SNX20Q7Z614 316 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CNTN4Q8IWV2 1026 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ZZZ3Q8IYH5 903 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PHC3Q8NDX5 983 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 OR2T29Q8NH02 315 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 FCGR1BQ92637 280 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TRIM63Q969Q1 353 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ITFG2Q969R8 447 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PPCDCQ96CD2 204 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 EBPLQ9BY08 206 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ZC4H2Q9NQZ6 224 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 RAD18Q9NS91 495 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CMTM6Q9NX76 183 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 KIAA1522Q9P206 1035 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PRKAG2Q9UGJ0 569 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GSTK1Q9Y2Q3 226 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 SLC45A1Q9Y2W3 748 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PCDHB3Q9Y5E6 796 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 LOXHD1Q8IVV2 1947 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MEIS3P2A8K0S8 358 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 FAM25AB3EWG3 89 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 FAM25CB3EWG5 89 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 FAM25GB3EWG6 89 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 OR10H3O60404 316 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PGLSO95336 258 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 FGF4P08620 206 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ANXA4P09525 319 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GRK3P35626 688 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GDF5P43026 501 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MAGEA10P43363 369 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GSTM5P46439 218 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 OR4D2P58180 307 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MVKQ03426 396 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ABHD18Q0P651 414 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 NAE1Q13564 534 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GRM2Q14416 872 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 USP39Q53GS9 565 aaKnown RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 C6orf141Q5SZD1 244 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GDF6Q6KF10 455 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GPR153Q6NV75 609 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 LARP4Q71RC2 724 aaKnown RBP eCLIP6.56□□□□□ -1.362e-8■■■□□ 15.4
CSDE1-205ENST00000438362 BEND5Q7L4P6 421 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 LYSMD3Q7Z3D4 306 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 MINDY2Q8NBR6 621 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ZMIZ2Q8NF64 920 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 OR10T2Q8NGX3 314 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 OR52J3Q8NH60 311 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 IPCEF1Q8WWN9 437 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TFAP2CQ92754 450 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 ISL2Q96A47 359 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PLD4Q96BZ4 506 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PAAF1Q9BRP4 392 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CHCHD6Q9BRQ6 235 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 EXD2Q9NVH0 621 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 NUMBLQ9Y6R0 609 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 SMCHD1A6NHR9 2005 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CENPXA8MT69 81 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 CLIC1O00299 241 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 SOCS7O14512 581 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TBX1O43435 398 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TMCC2O75069 709 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 PDE9AO76083 593 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 UGT2B4P06133 528 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 EFNA1P20827 205 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 GABRB3P28472 473 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 DNAJA1P31689 397 aaKnown RBP6.56□□□□□ -1.36
CSDE1-205ENST00000438362 IL12RB1P42701 662 aa6.56□□□□□ -1.36
CSDE1-205ENST00000438362 TPTEP56180 551 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms