RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 FOXM1Q08050 763 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 ARHGAP22Q7Z5H3 698 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 RALGPS2Q86X27 583 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-204ENST00000436978 PSMA8Q8TAA3 256 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 OR2AG1Q9H205 316 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 SMPD3Q9NY59 655 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-204ENST00000436978 RBPJLQ9UBG7 517 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 PCDHGB7Q9Y5F8 929 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 C4BP0C0L5 1744 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 DUXAA6NLW8 204 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 K7EPI3 171 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 MAT2AP31153 395 aaKnown RBP15.6■□□□□ 0.09
PTPN13-204ENST00000436978 CPNE9Q8IYJ1 553 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-204ENST00000436978 PLGRKTQ9HBL7 147 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 MRM3Q9HC36 420 aaKnown RBP15.6■□□□□ 0.09
PTPN13-204ENST00000436978 MYO18AQ92614 2054 aaKnown RBP15.6■□□□□ 0.09
PTPN13-204ENST00000436978 IQCMA0A1B0GVH7 501 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 SLC30A4O14863 429 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 GMFGO60234 142 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 IL7RP16871 459 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 NRG1Q02297 640 aaPredicted RBP15.6■□□□□ 0.09
PTPN13-204ENST00000436978 SLC30A6Q6NXT4 461 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 POMZP3Q6PJE2 187 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 LRRTM4Q86VH4 590 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 FAM81AQ8TBF8 368 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 ZNF446Q9NWS9 450 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 GDAP2Q9NXN4 497 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 DTLQ9NZJ0 730 aa15.6■□□□□ 0.09
PTPN13-204ENST00000436978 LOC110117498-PIK3R3F6TDL0 507 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 NME6O75414 186 aaPredicted RBP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 VNN1O95497 513 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 VIPR1P32241 457 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 THAP5Q7Z6K1 395 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 HPS6Q86YV9 775 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 CCM2Q9BSQ5 444 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 USP29Q9HBJ7 922 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 GATBO75879 557 aaKnown RBP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 NFKB2Q00653 900 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 FARSBQ9NSD9 589 aaKnown RBP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 COQ4Q9Y3A0 265 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 SNX10Q9Y5X0 201 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 IQCF5A8MTL0 148 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 NCBP2P52298 156 aaKnown RBP eCLIP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 PCDH19Q8TAB3 1148 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 ABCB10Q9NRK6 738 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 DNAJB1P25685 340 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 STARP49675 285 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 GPR107Q5VW38 600 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 ADGRG6Q86SQ4 1221 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 SCAMP5Q8TAC9 235 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 HMGB4Q8WW32 186 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 DGAT2Q96PD7 388 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 IKZF4Q9H2S9 585 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 SLC35C2Q9NQQ7 365 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 ALOX5P09917 674 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 FASTKD3Q14CZ7 662 aaKnown RBP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 RASGEF1AQ8N9B8 481 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 GSDMCQ9BYG8 508 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 ZNF776Q68DI1 518 aaPredicted RBP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 RBM44Q6ZP01 1051 aaKnown RBP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 GKN2Q86XP6 184 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 MKL2Q9ULH7 1088 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 U3KQV3 271 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 FAM234BA2RU67 622 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 IL18Q14116 193 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 PDE12Q6L8Q7 609 aaKnown RBP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 CAMK1GQ96NX5 476 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 APOBEC3GQ9HC16 384 aaKnown RBP15.59■□□□□ 0.09
PTPN13-204ENST00000436978 SIRPGQ9P1W8 387 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 YIPF1Q9Y548 306 aa15.59■□□□□ 0.09
PTPN13-204ENST00000436978 LAMA4Q16363 1823 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 ARHGEF33A8MVX0 844 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 BTN3A3O00478 584 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 PITPNM1O00562 1244 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 ENPP3O14638 875 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 PIK3CBP42338 1070 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 MAPK14Q16539 360 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 MBLAC2Q68D91 279 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 NUDT13Q86X67 352 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 TTYH3Q9C0H2 523 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 CDH7Q9ULB5 785 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 TMED5Q9Y3A6 229 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 MYO9BQ13459 2157 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 C9P02748 559 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 GDI1P31150 447 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 NIPAL1Q6NVV3 410 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 CAMKVQ8NCB2 501 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 GSTCDQ8NEC7 633 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 GIPC3Q8TF64 312 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 C8orf48Q96LL4 319 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 WDR55Q9H6Y2 383 aaPredicted RBP15.58■□□□□ 0.09
PTPN13-204ENST00000436978 FADS3Q9Y5Q0 445 aa15.58■□□□□ 0.09
PTPN13-204ENST00000436978 ABLIM1O14639 778 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 PLOD3O60568 738 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 ACRP10323 421 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 KCNE1P15382 129 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 ATP6V1C2Q8NEY4 427 aa15.58■□□□□ 0.08
PTPN13-204ENST00000436978 CENPNQ96H22 339 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms