RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 PRKACGP22612 351 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 LHCGRP22888 699 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 HMGCLP35914 325 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 PTGER3P43115 390 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 MAGEA8P43361 318 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 RXRGP48443 463 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 ADRM1Q16186 407 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 TYSND1Q2T9J0 566 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 CRTC1Q6UUV9 634 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 CHERPQ8IWX8 916 aaKnown RBP15.27■□□□□ 0.03
SCARF1-203ENST00000434376 LIX1Q8N485 282 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 ELMO1Q92556 727 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 ZNF599Q96NL3 588 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 COPS8Q99627 209 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 MYOCQ99972 504 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 IL21Q9HBE4 155 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 OLAHQ9NV23 265 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 WARS2Q9UGM6 360 aaKnown RBP15.27■□□□□ 0.03
SCARF1-203ENST00000434376 LIMD1Q9UGP4 676 aa15.27■□□□□ 0.03
SCARF1-203ENST00000434376 TRAV19A0A0A6YYK7 116 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 GRXCR1A8MXD5 290 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 MAN1A2O60476 641 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 ULK1O75385 1050 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 ABLIM3O94929 683 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 CPSF4O95639 269 aaKnown RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 SRCP12931 536 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 IL10P22301 178 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 PSMA4P25789 261 aaKnown RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 VARSP26640 1264 aaKnown RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 IRS1P35568 1242 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 VIPR2P41587 438 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 SFSWAPQ12872 951 aaKnown RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 NANOGP8Q6NSW7 305 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 CYP20A1Q6UW02 462 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 UBE2R2Q712K3 238 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 KIAA2013Q8IYS2 634 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 OR2AP1Q8NGE2 309 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 ITCHQ96J02 903 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 BRD9Q9H8M2 597 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 NANOGQ9H9S0 305 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 GID8Q9NWU2 228 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 AASSQ9UDR5 926 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 CFAP20Q9Y6A4 193 aaKnown RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 B4GAT1O43505 415 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 NOBOXO60393 691 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 ATE1O95260 518 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 MYCLP1P12525 358 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 POLD2P49005 469 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 CLCN7P51798 805 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 AARS2Q5JTZ9 985 aaKnown RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 HMBOX1Q6NT76 420 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 RBFAQ8N0V3 343 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 ZBTB2Q8N680 514 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 ZSWIM3Q96MP5 696 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 TMEM175Q9BSA9 504 aa15.26■□□□□ 0.03
SCARF1-203ENST00000434376 ARIH1Q9Y4X5 557 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 OAS3Q9Y6K5 1087 aaKnown RBP15.26■□□□□ 0.03
SCARF1-203ENST00000434376 STATHP02808 62 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 ESR1P03372 595 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 WDR5P61964 334 aaKnown RBP15.25■□□□□ 0.03
SCARF1-203ENST00000434376 MEF2AQ02078 507 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-203ENST00000434376 RHDQ02161 417 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 KANK2Q63ZY3 851 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 STK32CQ86UX6 486 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 SFTPA1Q8IWL2 248 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 FAM86B1Q8N7N1 296 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 OR2T34Q8NGX1 318 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 OR2T3Q8NH03 318 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 DPY30Q9C005 99 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 RIC8BQ9NVN3 520 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 FXYD1O00168 92 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 CLOCKO15516 846 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 GMNNO75496 209 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 UROSP10746 265 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 TYRP14679 529 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 IDO1P14902 403 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 EPCAMP16422 314 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 ZNF182P17025 639 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-203ENST00000434376 CD247P20963 164 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 PRKG2Q13237 762 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 STARD3Q14849 445 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 TCEAL5Q5H9L2 206 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 PERM1Q5SV97 790 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 SBSNQ6UWP8 590 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 ZNF784Q8NCA9 323 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-203ENST00000434376 ELOVL6Q9H5J4 265 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 ZNF232Q9UNY5 417 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 PTPRDP23468 1912 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 SH3PXD2BA1X283 911 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 PIM1P11309 404 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-203ENST00000434376 TMED10P49755 219 aaKnown RBP15.25■□□□□ 0.03
SCARF1-203ENST00000434376 EIF2B2P49770 351 aaKnown RBP15.25■□□□□ 0.03
SCARF1-203ENST00000434376 PRKCQQ04759 706 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 CCSMST1Q4G0I0 132 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 PROKR1Q8TCW9 393 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 KCNJ9Q92806 393 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 TRIM43Q96BQ3 446 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-203ENST00000434376 ADNPQ9H2P0 1102 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 PARVBQ9HBI1 364 aa15.25■□□□□ 0.03
SCARF1-203ENST00000434376 PCDH12Q9NPG4 1184 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms