RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 GOLM1Q8NBJ4 401 aa7.29□□□□□ -1.24
SYNPO2-203ENST00000434046 UTP15Q8TED0 518 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-203ENST00000434046 JPH3Q8WXH2 748 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-203ENST00000434046 VMP1Q96GC9 406 aa7.29□□□□□ -1.24
SYNPO2-203ENST00000434046 ALOXE3Q9BYJ1 711 aa7.29□□□□□ -1.24
SYNPO2-203ENST00000434046 MMP27Q9H306 513 aa7.29□□□□□ -1.24
SYNPO2-203ENST00000434046 PIGVQ9NUD9 493 aa7.29□□□□□ -1.24
SYNPO2-203ENST00000434046 TAS2R9Q9NYW1 312 aa7.29□□□□□ -1.24
SYNPO2-203ENST00000434046 NUP205Q92621 2012 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TTC24A2A3L6 582 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 CCDC182A6NF36 153 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MEIS3P2A8K0S8 358 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 E5RI56 91 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 GABARAPO95166 117 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 PTTG1O95997 202 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 IRF1P10914 325 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ATF4P18848 351 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MSH3P20585 1137 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 SCNN1AP37088 669 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 HERVK_113P63132 956 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ELAVL2Q12926 359 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MRPL28Q13084 256 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TP53BP2Q13625 1128 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 DEFB115Q30KQ5 88 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 PLEKHG6Q3KR16 790 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 GET4Q7L5D6 327 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 CTU1Q7Z7A3 348 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 CDH24Q86UP0 819 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MFSD6LQ8IWD5 586 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TCAIMQ8N3R3 496 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TMEM151AQ8N4L1 468 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 CAMKK1Q8N5S9 505 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 PIK3R3Q92569 461 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 FCRL2Q96LA5 508 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ACBD6Q9BR61 282 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ERVK-6Q9BXR3 956 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 AMBRA1Q9C0C7 1298 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ZFP14Q9HCL3 533 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 SCUBE2Q9NQ36 999 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TLR8Q9NR97 1041 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 IGSF5Q9NSI5 407 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 FLRT1Q9NZU1 646 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ZMYM5Q9UJ78 669 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 POLR3HQ9Y535 204 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MBLAC1A4D2B0 266 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 AGAP5A6NIR3 686 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 H7C4K7 107 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 BTN3A1O00481 513 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 HOXA2O43364 376 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 NOS1APO75052 506 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TMCC2O75069 709 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 CSF2P04141 144 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 NTRK1P04629 796 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 CTSKP43235 329 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 RENBPP51606 427 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 NUDT6P53370 316 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 AIF1P55008 147 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 GABARAPL2P60520 117 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 SNRPD2P62316 118 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MAPKAPK3Q16644 382 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 USP51Q70EK9 711 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 SLC24A5Q71RS6 500 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 GALNT13Q8IUC8 556 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 NPWQ8N729 165 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 FAM86B1Q8N7N1 296 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TTC29Q8NA56 475 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 CLHC1Q8NHS4 586 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 RASSF5Q8WWW0 418 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 KHSRPQ92945 711 aaKnown RBP eCLIP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 Q96MT0 163 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ASB2Q96Q27 587 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 CDK15Q96Q40 435 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 RHNO1Q9BSD3 238 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 COPS4Q9BT78 406 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 KIFC1Q9BW19 673 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TNKS2Q9H2K2 1166 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 C12orf4Q9NQ89 552 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 PRDM5Q9NQX1 630 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MARCH2Q9P0N8 246 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 GABRQQ9UN88 632 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 PCDHA9Q9Y5H5 950 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 OAS3Q9Y6K5 1087 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 KIAA1217Q5T5P2 1943 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ZFC3H1O60293 1989 aaKnown RBP7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MYADML2A6NDP7 307 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TMEM88BA6NKF7 163 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TTC34A8MYJ7 566 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 F5H5T6 163 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 hCG_2039718K7EN88 272 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 YES1P07947 543 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 PTGS2P35354 604 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 PIK3CGP48736 1102 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 SLC11A2P49281 568 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 ATP4BP51164 291 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TUBA1BP68363 451 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 MED22Q15528 200 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 TIGD6Q17RP2 521 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 RFX4Q33E94 735 aa7.28□□□□□ -1.24
SYNPO2-203ENST00000434046 BCL7AQ4VC05 210 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms