RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TTPAP49638 278 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 GFERP55789 205 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PPP1CAP62136 330 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPLD1P80108 840 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC7A5Q01650 507 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FOXM1Q08050 763 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PDIA2Q13087 525 aaKnown RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SQSTM1Q13501 440 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 LONRF1Q17RB8 773 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 HSP90AA5PQ58FG0 334 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 AARS2Q5JTZ9 985 aaKnown RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 COX20Q5RI15 118 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CACHD1Q5VU97 1274 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ALKBH2Q6NS38 261 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 MRNIPQ6NTE8 343 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ARMC6Q6NXE6 501 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FBXO38Q6PIJ6 1188 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FIGNL1Q6PIW4 674 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 WDR74Q6RFH5 385 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PACS1Q6VY07 963 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CAPN12Q6ZSI9 719 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SYDE1Q6ZW31 735 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CENPUQ71F23 418 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 TMEM135Q86UB9 458 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZFAND4Q86XD8 727 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PROSER1Q86XN7 944 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FAM129CQ86XR2 697 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PLXDC1Q8IUK5 500 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 VRK3Q8IV63 474 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLITRK4Q8IW52 837 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 DENND6AQ8IWF6 608 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PDIK1LQ8N165 341 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 C2orf73Q8N5S3 287 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 AVL9Q8NBF6 648 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR4D9Q8NGE8 314 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR5AR1Q8NGP9 310 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 HM13Q8TCT9 377 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 LKAAEAR1Q8TD35 194 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SKA2Q8WVK7 121 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 LCN9Q8WX39 176 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 TFGQ92734 400 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FGF11Q92914 225 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PEX13Q92968 403 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 TMEM159Q96B96 161 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CFAP36Q96G28 342 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SNF8Q96H20 258 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ELMO2Q96JJ3 720 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 RUNDC3BQ96NL0 473 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 EBNA1BP2Q99848 306 aaKnown RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 LRRC1Q9BTT6 524 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CARD6Q9BX69 1037 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 TSSK1BQ9BXA7 367 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 P2RY12Q9H244 342 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR52A5Q9H2C5 316 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 MRM3Q9HC36 420 aaKnown RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PPANQ9NQ55 473 aaKnown RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FBXO6Q9NRD1 293 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 POT1Q9NUX5 634 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 HRASLS2Q9NWW9 162 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC39A1Q9NY26 324 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 AKAP7Q9P0M2 348 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC24A2Q9UI40 661 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CDC23Q9UJX2 597 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PLAGL1Q9UM63 463 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CHMP2BQ9UQN3 213 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ASF1AQ9Y294 204 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 A0A1W2PNR3 127 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC5A10A0PJK1 596 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 GSAPA4D1B5 854 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 CNOT1A5YKK6 2376 aaKnown RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 KLHL33A6NCF5 533 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 TMEM8BA6NDV4 472 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 E5RI56 91 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 F8W8V4 182 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 QSOX1O00391 747 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PRMT5O14744 637 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PFDN6O15212 129 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 RRP8O43159 456 aaKnown RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PRAMEF10O60809 474 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 KRT37O76014 449 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 USP1O94782 785 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 SEC31AO94979 1220 aaKnown RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 APOA4P06727 396 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 TPBGLP0DKB5 382 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 THRAP10827 490 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PKMP14618 531 aaKnown RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 PGAM1P18669 254 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 AOAHP28039 575 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 CD151P48509 253 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ARL4DP49703 201 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ARL4CP56559 192 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 MPP1Q00013 466 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 DNAH14Q0VDD8 3507 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 CALCOCO2Q13137 446 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 COL9A2Q14055 689 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 MORF4L2Q15014 288 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 TGIF1Q15583 401 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 TBC1D25Q3MII6 688 aa5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF658BQ4V348 819 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P24-201ENST00000433260 CTSL3PQ5NE16 218 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms