RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 ZNF451Q9Y4E5 1061 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 SPTBP11277 2137 aa13.48□□□□□ -0.25
SEC13-211ENST00000431352 SPTBN1Q01082 2364 aaKnown RBP13.47□□□□□ -0.25
SEC13-211ENST00000431352 MED13Q9UHV7 2174 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 C2orf74A8MZ97 194 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 ZNF749O43361 778 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 SORBS2O94875 1100 aaKnown RBP13.47□□□□□ -0.25
SEC13-211ENST00000431352 CAPN1P07384 714 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 VAV2P52735 878 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 RWDD2BP57060 319 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 SLC9A5Q14940 896 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 DBN1Q16643 649 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 FHL5Q5TD97 284 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 NAPRTQ6XQN6 538 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 PIANPQ8IYJ0 282 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 CCDC170Q8IYT3 715 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 ZBTB2Q8N680 514 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 C19orf47Q8N9M1 422 aaKnown RBP13.47□□□□□ -0.25
SEC13-211ENST00000431352 FAM71DQ8N9W8 422 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 OR5AR1Q8NGP9 310 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 ALG3Q92685 438 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 TFGQ92734 400 aaPredicted RBP13.47□□□□□ -0.25
SEC13-211ENST00000431352 PPP1R2P1Q96PQ5 205 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 PITPNM3Q9BZ71 974 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 TFB2MQ9H5Q4 396 aaKnown RBP13.47□□□□□ -0.25
SEC13-211ENST00000431352 MVB12BQ9H7P6 319 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 MLXIPLQ9NP71 852 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 SLAMF7Q9NQ25 335 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 IRAK4Q9NWZ3 460 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 SMARCAL1Q9NZC9 954 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 SERTAD3Q9UJW9 196 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 PLAGL1Q9UM63 463 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 ICKQ9UPZ9 632 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 PCDHA3Q9Y5H8 950 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 DUSP10Q9Y6W6 482 aa13.47□□□□□ -0.25
SEC13-211ENST00000431352 IGLV3-16A0A075B6K0 115 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 C17orf113A0A1B0GUU1 675 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 OR51F1A6NGY5 319 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 DPM1O60762 260 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 TJP3O95049 919 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 UGT2B7P16662 529 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 AGXTP21549 392 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 PTPN7P35236 360 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 CETN2P41208 172 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 BOP1Q14137 746 aaKnown RBP13.46□□□□□ -0.25
SEC13-211ENST00000431352 GPR33Q49SQ1 333 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 ZNF658BQ4V348 819 aaPredicted RBP13.46□□□□□ -0.25
SEC13-211ENST00000431352 C4orf17Q53FE4 359 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 PAPD7Q5XG87 772 aaKnown RBP13.46□□□□□ -0.25
SEC13-211ENST00000431352 JMJD6Q6NYC1 403 aaPredicted RBP13.46□□□□□ -0.25
SEC13-211ENST00000431352 SPESP1Q6UW49 350 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 RAB43Q86YS6 212 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 GPR135Q8IZ08 494 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 ADGRF3Q8IZF5 1079 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 ELMO1Q92556 727 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 SYTL2Q9HCH5 934 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 NLE1Q9NVX2 485 aaPredicted RBP13.46□□□□□ -0.25
SEC13-211ENST00000431352 GPR83Q9NYM4 423 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 FEZ2Q9UHY8 353 aaPredicted RBP13.46□□□□□ -0.25
SEC13-211ENST00000431352 ASF1AQ9Y294 204 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 EFR3BQ9Y2G0 817 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 PADI2Q9Y2J8 665 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 TDRKHQ9Y2W6 561 aaKnown RBP13.46□□□□□ -0.25
SEC13-211ENST00000431352 MAP4K5Q9Y4K4 846 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 PRSS21Q9Y6M0 314 aa13.46□□□□□ -0.25
SEC13-211ENST00000431352 PCSK5Q92824 1860 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 TRBV5-4A0A0C4DH59 114 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 HCRTR1O43613 425 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 SEMA7AO75326 666 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 CEACAM4O75871 244 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 OR2B3O76000 313 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 IPO7O95373 1038 aaKnown RBP13.45□□□□□ -0.26
SEC13-211ENST00000431352 METTL18O95568 372 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 RNF224P0DH78 156 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 CBSLP0DN79 551 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 CBSP35520 551 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 CD151P48509 253 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 RRADP55042 308 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 CSE1LP55060 971 aaKnown RBP13.45□□□□□ -0.26
SEC13-211ENST00000431352 FOXL2P58012 376 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 CACNG1Q06432 222 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 RPA4Q13156 261 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 MRPL49Q13405 166 aaKnown RBP13.45□□□□□ -0.26
SEC13-211ENST00000431352 INPP5JQ15735 1006 aaPredicted RBP13.45□□□□□ -0.26
SEC13-211ENST00000431352 ZIC1Q15915 447 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 SYTL3Q4VX76 610 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 CCDC38Q502W7 563 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 SLC6A19Q695T7 634 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 MRGPREQ86SM8 312 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 TMEM102Q8N9M5 508 aaPredicted RBP13.45□□□□□ -0.26
SEC13-211ENST00000431352 Q8NA96 180 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 SGSM3Q96HU1 749 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 ALS2CR12Q96Q35 445 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
SEC13-211ENST00000431352 LRRC40Q9H9A6 602 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 ARNT2Q9HBZ2 717 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 FAM60AQ9NP50 221 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 CASS4Q9NQ75 786 aa13.45□□□□□ -0.26
SEC13-211ENST00000431352 SPHK1Q9NYA1 384 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms