RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RGS14O43566 566 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 LEFTY1O75610 366 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 STAMBPO95630 424 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 GPIP06744 558 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 CYP2A6P11509 494 aaPredicted RBP13.65□□□□□ -0.22
HOXC4-202ENST00000430889 HRH2P25021 359 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 OXTRP30559 389 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 IRS1P35568 1242 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 RPIAP49247 311 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 TXNL4AP83876 142 aaKnown RBP13.65□□□□□ -0.22
HOXC4-202ENST00000430889 MYBPC1Q00872 1141 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 UBE3AQ05086 875 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 INPP5AQ14642 412 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 C6orf52Q5T4I8 152 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 PPP4R4Q6NUP7 873 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 SERPINA13PQ6UXR4 307 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 TECPR1Q7Z6L1 1165 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 AMIGO2Q86SJ2 522 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 EPHX4Q8IUS5 362 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 TCAIMQ8N3R3 496 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 GALNT4Q8N4A0 578 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 DDHD1Q8NEL9 900 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 NUDT8Q8WV74 236 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 EME1Q96AY2 570 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 ZNF707Q96C28 371 aaPredicted RBP13.65□□□□□ -0.22
HOXC4-202ENST00000430889 TMEM74Q96NL1 305 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 LRRC3BQ96PB8 259 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 PARVBQ9HBI1 364 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 PCDH12Q9NPG4 1184 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 DKK3Q9UBP4 350 aa13.65□□□□□ -0.22
HOXC4-202ENST00000430889 CROCCQ5TZA2 2017 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 DENND4AQ7Z401 1863 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 SERTM1A2A2V5 107 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 C5orf67F2Z3F1 127 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 FFAR3O14843 346 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 GPR42O15529 346 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 HNRNPRO43390 633 aaKnown RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 PRAMEF4O60810 478 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 AP2A2O94973 939 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 CEBPBP17676 345 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 POLR2EP19388 210 aaKnown RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 PRPH2P23942 346 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 RPL38P63173 70 aaKnown RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 PRKCQQ04759 706 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 MAD2L1Q13257 205 aaPredicted RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 GK3PQ14409 553 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 PRAMEF9Q5VWM5 478 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 UBE2R2Q712K3 238 aaPredicted RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 DPPA4Q7L190 304 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 CARM1Q86X55 608 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 RGL4Q8IZJ4 473 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 ST13P4Q8IZP2 240 aaPredicted RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 TRAM1L1Q8N609 369 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 KIAA1958Q8N8K9 716 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 L3MBTL4Q8NA19 623 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 TRPV3Q8NET8 790 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 HCAR2Q8TDS4 363 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 CYB5D2Q8WUJ1 264 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 SORCS1Q8WY21 1168 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 CGREF1Q99674 301 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 KCTD14Q9BQ13 255 aaPredicted RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 SPATA16Q9BXB7 569 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 FAM83DQ9H4H8 585 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 DUS2Q9NX74 493 aaKnown RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 KLQ9UEF7 1012 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 CD84Q9UIB8 345 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 USP22Q9UPT9 525 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 ANGPTL3Q9Y5C1 460 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 TCF20Q9UGU0 1960 aaKnown RBP13.64□□□□□ -0.23
HOXC4-202ENST00000430889 KIAA1549LQ6ZVL6 1849 aa13.64□□□□□ -0.23
HOXC4-202ENST00000430889 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 FADS2P1A8MWK0 482 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 DLGAP1O14490 977 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 KIF1CO43896 1103 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 ULK1O75385 1050 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SLCO2B1O94956 709 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 CLDN9O95484 217 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 MTHFD1P11586 935 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SLC2A4P14672 509 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SYN1P17600 705 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 ARL1P40616 181 aaPredicted RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 GNPDA1P46926 289 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 DGKQP52824 942 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 HMGCS1Q01581 520 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 PWP1Q13610 501 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 BOP1Q14137 746 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 ARHGEF7Q14155 803 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SELPLGQ14242 412 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 USP39Q53GS9 565 aaKnown RBP13.63□□□□□ -0.23
HOXC4-202ENST00000430889 NEK5Q6P3R8 708 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SUSD1Q6UWL2 747 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SPRED2Q7Z698 418 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 UBE2Q1Q7Z7E8 422 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 PACRGLQ8N7B6 248 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 BADQ92934 168 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 SCAMP4Q969E2 229 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 HHIPQ96QV1 700 aa13.63□□□□□ -0.23
HOXC4-202ENST00000430889 OSBPL11Q9BXB4 747 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 355.7 ms