RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ENGP17813 658 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 HIST1H2ADP20671 130 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ACADLP28330 430 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ATP1A2P50993 1020 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 BIRC2Q13490 618 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 MPP2Q14168 576 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 RPE65Q16518 533 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 PHKG1Q16816 387 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ZNF423Q2M1K9 1284 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 DEFB133Q30KQ1 61 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 CCDC153Q494R4 210 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 TTC23LQ6PF05 361 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 SBSNQ6UWP8 590 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ISCA2Q86U28 154 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 TAX1BP1Q86VP1 789 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ARFGAP2Q8N6H7 521 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 OR5AR1Q8NGP9 310 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 OR2I1PQ8NGU4 316 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 FAM76AQ8TAV0 307 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 STAG3L4Q8TBR4 150 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 RDH11Q8TC12 318 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 MCOLN3Q8TDD5 553 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 DYDC1Q8WWB3 177 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ASB11Q8WXH4 323 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 TFGQ92734 400 aaPredicted RBP7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 HIST1H2AHQ96KK5 128 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 FERD3LQ96RJ6 166 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 HIST1H2AJQ99878 128 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 EGFL8Q99944 293 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 H2AFJQ9BTM1 129 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 TRIT1Q9H3H1 467 aaKnown RBP7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 GAREM1Q9H706 876 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 CNOT10Q9H9A5 744 aaKnown RBP7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 IL21RQ9HBE5 538 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 PARVBQ9HBI1 364 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 ARL15Q9NXU5 204 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 NUDT4Q9NZJ9 180 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 CD274Q9NZQ7 290 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 SIRPGQ9P1W8 387 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 TDRKHQ9Y2W6 561 aaKnown RBP7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 HCN4Q9Y3Q4 1203 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 OARD1Q9Y530 152 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 HEBP2Q9Y5Z4 205 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 PLXNB3Q9ULL4 1909 aa7.72□□□□□ -1.17
HMGA1P4-201ENST00000428643 EML5Q05BV3 1969 aa7.71□□□□□ -1.17
HMGA1P4-201ENST00000428643 TRBV23OR9-2A0A075B6M9 112 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 KIR2DS5A0A0G2JLQ3 304 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 A0A0G2JNG1 304 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 CCDC189A1A4V9 331 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 KRT87PA6NCN2 255 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 NEMP2A6NFY4 417 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 NCF1BA6NI72 391 aaPredicted RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 NCF1CA8MVU1 366 aaPredicted RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 KIR2DS3K7RE56 304 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 YY2O15391 372 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PSIP1O75475 530 aaKnown RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 C1orf105O95561 183 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 GUCA1CO95843 209 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 VIPP01282 170 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 LMNAP02545 664 aaKnown RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 ENO2P09104 434 aaPredicted RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 ALPPL2P10696 532 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 NEFHP12036 1026 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 NCF1P14598 390 aaPredicted RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 CPA3P15088 417 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 TAC1P20366 129 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 NBL1P41271 181 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 RXRGP48443 463 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SERPINB4P48594 390 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PRKG2Q13237 762 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 KIR2DS5Q14953 304 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 CLCA4Q14CN2 919 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PLCL1Q15111 1095 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SF3A2Q15428 464 aaKnown RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SHBQ15464 509 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PPP1R3AQ16821 1122 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 CAPRIN2Q6IMN6 1127 aaKnown RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 ABRAXAS1Q6UWZ7 409 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 WASH2PQ6VEQ5 465 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 ZYG11AQ6WRX3 759 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 CYHR1Q6ZMK1 362 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 MBOAT1Q6ZNC8 495 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 GATAD2AQ86YP4 633 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 TBC1D21Q8IYX1 336 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SDR16C5Q8N3Y7 309 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 FBXO39Q8N4B4 442 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 MINDY1Q8N5J2 469 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PTGR2Q8N8N7 351 aaPredicted RBP7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 AVL9Q8NBF6 648 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 KYQ8NBH2 561 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SUMF1Q8NBK3 374 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PHC3Q8NDX5 983 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 OR5K2Q8NHB8 316 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 PPP1R14CQ8TAE6 165 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 RHEBL1Q8TAI7 183 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 MDM1Q8TC05 714 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 MAPK15Q8TD08 544 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 MAGEC3Q8TD91 643 aa7.71□□□□□ -1.18
HMGA1P4-201ENST00000428643 SLC37A2Q8TED4 501 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms