RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 KDM1AO60341 852 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 KERAO60938 352 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 ESRRBO95718 433 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 FDXRP22570 491 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 TNK2Q07912 1038 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 ABRQ12979 859 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 CRY1Q16526 586 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 CYP2A13Q16696 494 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 TXNDC8Q6A555 127 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 CNKSR3Q6P9H4 555 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 BTLAQ7Z6A9 289 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 SLC15A4Q8N697 577 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 ARL14EPQ8N8R7 260 aaPredicted RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 SPPL2AQ8TCT8 520 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 OSCP1Q8WVF1 389 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 MAELQ96JY0 434 aaKnown RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 ADGRE3Q9BY15 652 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 IKZF5Q9H5V7 419 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 PCDHB3Q9Y5E6 796 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 OAS3Q9Y6K5 1087 aaKnown RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 ALPK3Q96L96 1907 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 C8BP07358 591 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 RFC2P35250 354 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 CLK1P49759 484 aaKnown RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 IL10RBQ08334 325 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 KCNAB2Q13303 367 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 MANEALQ5VSG8 457 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 AFTPHQ6ULP2 937 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 Q6ZPB1 254 aaPredicted RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 GOLGA7Q7Z5G4 137 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 TTC30BQ8N4P2 665 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 PROKR1Q8TCW9 393 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 ROPN1LQ96C74 230 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 ACAT2Q9BWD1 397 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 ZNF385DQ9H6B1 395 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 EXOSC4Q9NPD3 245 aaKnown RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP42-203ENST00000426246 ZNF225Q9UK10 706 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 TTC36A6NLP5 189 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 CFAP99D6REC4 459 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 FFAR2O15552 330 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 UROSP10746 265 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 DBTP11182 482 aaKnown RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 PIGAP37287 484 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 ALDH7A1P49419 539 aaKnown RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 ARSFP54793 590 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 RFTN1Q14699 578 aaPredicted RBP13.12□□□□□ -0.31
USP42-203ENST00000426246 ZBED5Q49AG3 693 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 AHSA2Q719I0 299 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 HORMAD1Q86X24 394 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 CNTN4Q8IWV2 1026 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 TOP1MTQ969P6 601 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 KIAA1191Q96A73 305 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 NSMCE3Q96MG7 304 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 LHPPQ9H008 270 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 SACM1LQ9NTJ5 587 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 DNAH14Q0VDD8 3507 aa13.12□□□□□ -0.31
USP42-203ENST00000426246 SMAD6O43541 496 aaKnown RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 NADKO95544 446 aaPredicted RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 CLTBP09497 229 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 ADRM1Q16186 407 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 VTCN1Q7Z7D3 282 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 HMGN2P46Q86SG4 172 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 TSPAN33Q86UF1 283 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 SLCO6A1Q86UG4 719 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 TBC1D21Q8IYX1 336 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 UMODL1-AS1Q8N2C9 162 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 CLIP4Q8N3C7 705 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 NPLQ9BXD5 320 aaPredicted RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 F5P12259 2224 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 TYW5A2RUC4 315 aaKnown RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 PRMT5O14744 637 aaPredicted RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 ACSL4O60488 711 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 S100A3P33764 101 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 RGS4P49798 205 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 STK19P49842 368 aaPredicted RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 BMXP51813 675 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 TRAP1Q12931 704 aaKnown RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 BNIP2Q12982 314 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 CACHD1Q5VU97 1274 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 GPR153Q6NV75 609 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 FBXO46Q6PJ61 603 aaPredicted RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 DOK6Q6PKX4 331 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 Q6ZSR9 355 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 NECAB2Q7Z6G3 386 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 C11orf96Q7Z7L8 435 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 NKAPQ8N5F7 415 aaKnown RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 ZNF540Q8NDQ6 660 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 LKAAEAR1Q8TD35 194 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 TTPALQ9BTX7 342 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 SDR39U1Q9NRG7 319 aaPredicted RBP13.11□□□□□ -0.31
USP42-203ENST00000426246 PCDHGA8Q9Y5G5 932 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 RAD51BO15315 384 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms