RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 A0A1B0GUH1 482 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 BTN3A1O00481 513 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 DDX3YO15523 660 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PSTPIP1O43586 416 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 GAS8O95995 478 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 AGTP01019 485 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 GYPCP04921 128 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CD68P34810 354 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PPARGP37231 505 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PBX1P40424 430 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SOX8P57073 446 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 WASHC5Q12768 1159 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ABRQ12979 859 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PRKG2Q13237 762 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LAMB3Q13751 1172 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 NOMO1Q15155 1222 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PRR30Q53SZ7 412 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LCN10Q6JVE6 187 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SPOCD1Q6ZMY3 1216 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 MRGPREQ86SM8 312 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LUZP1Q86V48 1076 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CPNE8Q86YQ8 564 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TBC1D21Q8IYX1 336 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 NXPE1Q8N323 547 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 C19orf47Q8N9M1 422 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PHC3Q8NDX5 983 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 OR52E1Q8NGJ3 308 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 OR2Y1Q8NGV0 311 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SLC22A18Q96BI1 424 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 C19orf60Q96EN9 201 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FICDQ9BVA6 458 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TSSK1BQ9BXA7 367 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PACSIN1Q9BY11 444 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PITPNM3Q9BZ71 974 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 COG4Q9H9E3 785 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 INTS7Q9NVH2 962 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 IL1RAPL1Q9NZN1 696 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SAE1Q9UBE0 346 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FKBPLQ9UIM3 349 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PLCL2Q9UPR0 1127 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ASF1AQ9Y294 204 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ARL5AQ9Y689 179 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
HLA-DQB3-203ENST00000425319 HEATR9A2RTY3 570 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ISM1B1AKI9 464 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 AGPSO00116 658 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 BTN3A3O00478 584 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LIN7AO14910 233 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 AP2A2O94973 939 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FTH1P02794 183 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 RPN2P04844 631 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 UQCRHP07919 91 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ATXN8OSP0DMR3 200 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 COMTP21964 271 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ELAVL4P26378 380 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 COL8A1P27658 744 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CDKN2BP42772 138 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ZC3H12BQ5HYM0 836 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 C1orf189Q5VU69 101 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TTC23LQ6PF05 361 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SPESP1Q6UW49 350 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FAM198BQ6UWH4 519 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CDHR3Q6ZTQ4 885 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CDKL3Q8IVW4 592 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SRRM1Q8IYB3 904 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 UBE2Q2Q8WVN8 375 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 RMDN2Q96LZ7 410 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 WDR77Q9BQA1 342 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CHRNA10Q9GZZ6 450 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ZNF552Q9H707 407 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 NHEJ1Q9H9Q4 299 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 OR6C2Q9NZP2 312 aa11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TDRKHQ9Y2W6 561 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ZSCAN9O15535 394 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PSMD3O43242 534 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CLDN1O95832 211 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ALBP02768 609 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CAPN1P07384 714 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CBSLP0DN79 551 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CBSP35520 551 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 COPS2P61201 443 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TMPRSS15P98073 1019 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CDC16Q13042 620 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 KIR2DS3Q14952 304 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LLGL1Q15334 1064 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TLR1Q15399 786 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SLC5A12Q1EHB4 618 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FAM214AQ32MH5 1076 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 NKAIN1Q4KMZ8 207 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SYTL3Q4VX76 610 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 DARS2Q6PI48 645 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FAM180AQ6UWF9 173 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 RANBP10Q6VN20 620 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 Q6ZS92 163 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 RAB42Q8N4Z0 105 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ZNF655Q8N720 491 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 GSDMBQ8TAX9 411 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PPP4R1Q8TF05 950 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms