RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 LOC730098B7Z3J9 87 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 FBP2O00757 339 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 EBLN1P0CF75 366 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 PDHA2P29803 388 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 NTSR1P30989 418 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 STX5Q13190 355 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 ART3Q13508 389 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 GSTA3Q16772 222 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 TRMT5Q32P41 509 aaKnown RBP25.88■■□□□ 1.73
LDB1-202ENST00000425280 PTCHD3Q3KNS1 767 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 TMEM196Q5HYL7 178 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.88■■□□□ 1.73
LDB1-202ENST00000425280 ADAMTSL4Q6UY14 1074 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 CHRDL2Q6WN34 429 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 RIPOR1Q6ZS17 1223 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 OR2T3Q8NH03 318 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 FOXJ1Q92949 421 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 GABRG3Q99928 467 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 CD248Q9HCU0 757 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 SDR39U1Q9NRG7 319 aaPredicted RBP25.88■■□□□ 1.73
LDB1-202ENST00000425280 TRPS1Q9UHF7 1281 aa25.88■■□□□ 1.73
LDB1-202ENST00000425280 ZFC3H1O60293 1989 aaKnown RBP25.88■■□□□ 1.73
LDB1-202ENST00000425280 SPTBN5Q9NRC6 3674 aaKnown RBP25.88■■□□□ 1.73
LDB1-202ENST00000425280 EGFP01133 1207 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 IDO1P14902 403 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 ZNF8P17098 575 aaPredicted RBP25.87■■□□□ 1.73
LDB1-202ENST00000425280 DIO3P55073 304 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 NME5P56597 212 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 GTF2H3Q13889 308 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 ABRAXAS2Q15018 415 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 PNCKQ6P2M8 343 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 ZNF547Q8IVP9 402 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 EFCAB3Q8N7B9 438 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 FBXL8Q96CD0 374 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 COX14Q96I36 57 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 SLC25A23Q9BV35 468 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 MRPL1Q9BYD6 325 aaKnown RBP25.87■■□□□ 1.73
LDB1-202ENST00000425280 PRO3102Q9H379 93 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 L3MBTL1Q9Y468 752 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 GPR45Q9Y5Y3 372 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 COL4A2P08572 1712 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 VEGFDO43915 354 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 RNASEH2AO75792 299 aaKnown RBP25.87■■□□□ 1.73
LDB1-202ENST00000425280 SORBS2O94875 1100 aaKnown RBP25.87■■□□□ 1.73
LDB1-202ENST00000425280 C6orf136Q5SQH8 315 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 C6orf163Q5TEZ5 329 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 PGAM4Q8N0Y7 254 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 SFRP1Q8N474 314 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 ZNF514Q96K75 400 aaPredicted RBP25.87■■□□□ 1.73
LDB1-202ENST00000425280 HBEGFQ99075 208 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 MKRN2Q9H000 416 aaKnown RBP25.87■■□□□ 1.73
LDB1-202ENST00000425280 NDE1Q9NXR1 346 aa25.87■■□□□ 1.73
LDB1-202ENST00000425280 TRPM6Q9BX84 2022 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 H3BQ06 376 aaPredicted RBP25.86■■□□□ 1.73
LDB1-202ENST00000425280 WDR47O94967 919 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 PCCBP05166 539 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 IGFBP4P22692 258 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 MAP4P27816 1152 aaKnown RBP25.86■■□□□ 1.73
LDB1-202ENST00000425280 ERVK-8P63133 956 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 IRX1P78414 480 aaPredicted RBP25.86■■□□□ 1.73
LDB1-202ENST00000425280 PON2Q15165 354 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 WSCD2Q2TBF2 565 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 C1orf146Q5VVC0 180 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 REP15Q6BDI9 236 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 XKR5Q6UX68 686 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 CFAP206Q8IYR0 622 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 FBXW8Q8N3Y1 598 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 IL17RCQ8NAC3 791 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 PYCR2Q96C36 320 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 LINC00615Q96LM1 132 aaPredicted RBP25.86■■□□□ 1.73
LDB1-202ENST00000425280 WDR41Q9HAD4 459 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 AIG1Q9NVV5 245 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 PRPF19Q9UMS4 504 aaKnown RBP25.86■■□□□ 1.73
LDB1-202ENST00000425280 FFAR3O14843 346 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 LIN7AO14910 233 aaPredicted RBP25.86■■□□□ 1.73
LDB1-202ENST00000425280 GPR42O15529 346 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 MTTPP55157 894 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 ACTR3P61158 418 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 ATP6AP1LQ52LC2 224 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 NEK5Q6P3R8 708 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 ENDOVQ8N8Q3 282 aaKnown RBP25.86■■□□□ 1.73
LDB1-202ENST00000425280 GPR34Q9UPC5 381 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 TMEM98Q9Y2Y6 226 aa25.86■■□□□ 1.73
LDB1-202ENST00000425280 H3BM21 787 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 ADAM23O75077 832 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 POU3F3P20264 500 aaPredicted RBP25.85■■□□□ 1.73
LDB1-202ENST00000425280 MRPL19P49406 292 aaKnown RBP25.85■■□□□ 1.73
LDB1-202ENST00000425280 RPS6KA2Q15349 733 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 SDE2Q6IQ49 451 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 HEATR4Q86WZ0 1026 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 HPS6Q86YV9 775 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 ATG10Q9H0Y0 220 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 DCLRE1BQ9H816 532 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 KLQ9UEF7 1012 aa25.85■■□□□ 1.73
LDB1-202ENST00000425280 GRXCR2A6NFK2 248 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 C2CD4DB7Z1M9 353 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 CHUKO15111 745 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 CLDN9O95484 217 aa25.84■■□□□ 1.73
LDB1-202ENST00000425280 LMNAP02545 664 aaKnown RBP25.84■■□□□ 1.73
LDB1-202ENST00000425280 CATP04040 527 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms