RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 CPZQ66K79 652 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 DRICH1Q6PGQ1 229 aaPredicted RBP12.61□□□□□ -0.39
VRK3-203ENST00000424804 ASB18Q6ZVZ8 466 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 SNX20Q7Z614 316 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 RASGEF1CQ8N431 466 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 STYXQ8WUJ0 223 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 ULK4Q96C45 1275 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 C12orf66Q96MD2 445 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 PSMG3-AS1Q96PY0 264 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 NAP1L3Q99457 506 aaPredicted RBP12.61□□□□□ -0.39
VRK3-203ENST00000424804 IMP3Q9NV31 184 aaKnown RBP12.61□□□□□ -0.39
VRK3-203ENST00000424804 NLE1Q9NVX2 485 aaPredicted RBP12.61□□□□□ -0.39
VRK3-203ENST00000424804 ACSL5Q9ULC5 683 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 BTRCQ9Y297 605 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 MAN2B2Q9Y2E5 1009 aa12.61□□□□□ -0.39
VRK3-203ENST00000424804 IGLV3-16A0A075B6K0 115 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 HEATR9A2RTY3 570 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 OR51F1A6NGY5 319 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 CFAP99D6REC4 459 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 MKRN2OSH3BPM6 223 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 SNRNP200O75643 2136 aaKnown RBP12.6□□□□□ -0.39
VRK3-203ENST00000424804 RFPL1O75677 317 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 KRT14P02533 472 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 RORAP35398 523 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 TUBB4BP68371 445 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 HSD11B2P80365 405 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 ABRQ12979 859 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 TUBB2AQ13885 445 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 DNTTIP2Q5QJE6 756 aaKnown RBP12.6□□□□□ -0.39
VRK3-203ENST00000424804 TTC27Q6P3X3 843 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 CCDC137Q6PK04 289 aaKnown RBP12.6□□□□□ -0.39
VRK3-203ENST00000424804 SERPINA9Q86WD7 417 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 NXPE1Q8N323 547 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 PPHLN1Q8NEY8 458 aaKnown RBP12.6□□□□□ -0.39
VRK3-203ENST00000424804 CDKN2AIPNLQ96HQ2 116 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 LRFN5Q96NI6 719 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 COPS8Q99627 209 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 TUBB2BQ9BVA1 445 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 GPR87Q9BY21 358 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 LATS2Q9NRM7 1088 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 KCND1Q9NSA2 647 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 SNX12Q9UMY4 172 aa12.6□□□□□ -0.39
VRK3-203ENST00000424804 FARSAQ9Y285 508 aaKnown RBP12.6□□□□□ -0.39
VRK3-203ENST00000424804 ANKRD12Q6UB98 2062 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 TRBV5-4A0A0C4DH59 114 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 H3BMH7 237 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 BTN3A3O00478 584 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 CEACAM4O75871 244 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 SUN1O94901 812 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 ZBTB11O95625 1053 aaPredicted RBP12.59□□□□□ -0.39
VRK3-203ENST00000424804 POLBP06746 335 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 POLR2CP19387 275 aaPredicted RBP12.59□□□□□ -0.39
VRK3-203ENST00000424804 PDHA2P29803 388 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 COILP38432 576 aaPredicted RBP12.59□□□□□ -0.39
VRK3-203ENST00000424804 PRLHRP49683 370 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 CRADDP78560 199 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 CHAF1BQ13112 559 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 IZUMO3Q5VZ72 239 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 PAPD7Q5XG87 772 aaKnown RBP12.59□□□□□ -0.39
VRK3-203ENST00000424804 KLHL35Q6PF15 583 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 C4orf22Q6V702 233 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 CFAP206Q8IYR0 622 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 CARFQ8N187 725 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 OR4E2Q8NGC2 313 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 OR6P1Q8NGX9 317 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 C19orf43Q9BQ61 176 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 CHST8Q9H2A9 424 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 OR52A5Q9H2C5 316 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 CASS4Q9NQ75 786 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 ZDHHC3Q9NYG2 299 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 SLC2A6Q9UGQ3 507 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 POMT2Q9UKY4 750 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 HIVEP3Q5T1R4 2406 aa12.59□□□□□ -0.39
VRK3-203ENST00000424804 TEX15Q9BXT5 2789 aa12.58□□□□□ -0.39
VRK3-203ENST00000424804 C17orf113A0A1B0GUU1 675 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 TCRBV7S3A2A0A539 114 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 UBA6A0AVT1 1052 aaPredicted RBP12.58□□□□□ -0.4
VRK3-203ENST00000424804 CCDC162PA2VCL2 907 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 KLHL33A6NCF5 533 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 SLC9B1P1A6NJY1 282 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 GOLGA8MH3BSY2 632 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 PHF2O75151 1096 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 SCRG1O75711 98 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 TPBGLP0DKB5 382 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 ADRA1DP25100 572 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 PSMA3P25788 255 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 MGAT1P26572 445 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 PRAMEP78395 509 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 CACNG1Q06432 222 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 PLCL1Q15111 1095 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 GPR33Q49SQ1 333 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 TSTD2Q5T7W7 516 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 ZNF385CQ66K41 422 aaPredicted RBP12.58□□□□□ -0.4
VRK3-203ENST00000424804 SYVN1Q86TM6 617 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 OOSP2Q86WS3 158 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 DSELQ8IZU8 1212 aa12.58□□□□□ -0.4
VRK3-203ENST00000424804 C17orf53Q8N3J3 647 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms