RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 KLHL6Q8WZ60 621 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 LPGAT1Q92604 370 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 IL1RAPL1Q9NZN1 696 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 LHX6Q9UPM6 363 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 B3GALT1Q9Y5Z6 326 aa18.17■□□□□ 0.5
PRNP-202ENST00000424424 SLCO2B1O94956 709 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 SHMT2P34897 504 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 ITGA8P53708 1063 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 TMPRSS3P57727 454 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 PPP1CAP62136 330 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 CLN3Q13286 438 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 PLEKHS1Q5SXH7 462 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 HIBCHQ6NVY1 386 aaPredicted RBP18.16■□□□□ 0.5
PRNP-202ENST00000424424 CENPUQ71F23 418 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 ZFAND4Q86XD8 727 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 KMT5CQ86Y97 462 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 CARFQ8N187 725 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 AGGF1Q8N302 714 aaeCLIP18.16■□□□□ 0.5
PRNP-202ENST00000424424 SIDT2Q8NBJ9 832 aaKnown RBP18.16■□□□□ 0.5
PRNP-202ENST00000424424 BIRC8Q96P09 236 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 MAP3K3Q99759 626 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 EBNA1BP2Q99848 306 aaKnown RBP18.16■□□□□ 0.5
PRNP-202ENST00000424424 FAM167BQ9BTA0 163 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 TRIM31Q9BZY9 425 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 CCDC68Q9H2F9 335 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 SEMA5BQ9P283 1151 aa18.16■□□□□ 0.5
PRNP-202ENST00000424424 TDRKHQ9Y2W6 561 aaKnown RBP18.16■□□□□ 0.5
PRNP-202ENST00000424424 ANKRD11Q6UB99 2663 aaPredicted RBP18.16■□□□□ 0.5
PRNP-202ENST00000424424 GSAPA4D1B5 854 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 FAM187AA6NFU0 413 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.15■□□□□ 0.5
PRNP-202ENST00000424424 E5RI56 91 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 SEC31AO94979 1220 aaKnown RBP18.15■□□□□ 0.5
PRNP-202ENST00000424424 PKMP14618 531 aaKnown RBP18.15■□□□□ 0.5
PRNP-202ENST00000424424 NELFEP18615 380 aaKnown RBP18.15■□□□□ 0.5
PRNP-202ENST00000424424 CHRM3P20309 590 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 ARL4CP56559 192 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 ABRQ12979 859 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 CTBP1Q13363 440 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 SPANXN3Q5MJ09 141 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 CTSL3PQ5NE16 218 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 TTC23LQ6PF05 361 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 KCNMB4Q86W47 210 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 CFAP61Q8NHU2 1237 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 SKA2Q8WVK7 121 aaPredicted RBP18.15■□□□□ 0.5
PRNP-202ENST00000424424 LRRC39Q96DD0 335 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 OR6C1Q96RD1 312 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 CTRCQ99895 268 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 SIDT1Q9NXL6 827 aaKnown RBP18.15■□□□□ 0.5
PRNP-202ENST00000424424 CDYLQ9Y232 598 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 MRFAP1Q9Y605 127 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 SDK2Q58EX2 2172 aa18.15■□□□□ 0.5
PRNP-202ENST00000424424 IGHV5-51A0A0C4DH38 117 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 C2orf74A8MZ97 194 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 MAP3K7O43318 606 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 ZBTB11O95625 1053 aaPredicted RBP18.14■□□□□ 0.49
PRNP-202ENST00000424424 S1PR4O95977 384 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 CDH3P22223 829 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 ATP1A2P50993 1020 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 KPNA2P52292 529 aaKnown RBP18.14■□□□□ 0.49
PRNP-202ENST00000424424 IL11RAQ14626 422 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 CRYMQ14894 314 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 HIF1AQ16665 826 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 HSP90AA5PQ58FG0 334 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 TMTC4Q5T4D3 741 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 UNC5DQ6UXZ4 953 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 VRK3Q8IV63 474 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 DENND6AQ8IWF6 608 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 PMEPA1Q969W9 287 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 SLC41A2Q96JW4 573 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 C16orf45Q96MC5 204 aaPredicted RBP18.14■□□□□ 0.49
PRNP-202ENST00000424424 FOPNLQ96NB1 174 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 CCNL2Q96S94 520 aaPredicted RBP18.14■□□□□ 0.49
PRNP-202ENST00000424424 APMAPQ9HDC9 416 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 PDE7BQ9NP56 450 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 C1GALT1Q9NS00 363 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 POMT2Q9UKY4 750 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 COMMD10Q9Y6G5 202 aa18.14■□□□□ 0.49
PRNP-202ENST00000424424 PIPSLA2A3N6 862 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 BTN3A3O00478 584 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 BTN3A1O00481 513 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 NIPSNAP2O75323 286 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 BANF1O75531 89 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 PRDX3P30048 256 aaKnown RBP18.13■□□□□ 0.49
PRNP-202ENST00000424424 SLC1A2P43004 574 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 CXADRP78310 365 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 SH3BP2P78314 561 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 HSD11B2P80365 405 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 ACY1Q03154 408 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 CKAP4Q07065 602 aaKnown RBP18.13■□□□□ 0.49
PRNP-202ENST00000424424 C2orf54Q08AI8 447 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 CALCOCO2Q13137 446 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 TGIF1Q15583 401 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 MSS51Q4VC12 460 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 MANEAQ5SRI9 462 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 CCDC81Q6ZN84 652 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 BPHLQ86WA6 291 aaPredicted RBP18.13■□□□□ 0.49
PRNP-202ENST00000424424 DTX1Q86Y01 620 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 RASGRP3Q8IV61 690 aa18.13■□□□□ 0.49
PRNP-202ENST00000424424 DCUN1D3Q8IWE4 304 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms