RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SMYD5Q6GMV2 418 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 TIGD7Q6NT04 549 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 TRNP1Q6NT89 227 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 TLDC1Q6P9B6 456 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 GJB7Q6PEY0 223 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ARHGAP36Q6ZRI8 547 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ACAD11Q709F0 780 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 WDR53Q7Z5U6 358 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 YTHDF3Q7Z739 585 aaKnown RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ADGRG6Q86SQ4 1221 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 AMZ2Q86W34 360 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 METTL27Q8N6F8 245 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 LPCAT1Q8NF37 534 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 OR5M3Q8NGP4 307 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 LCN9Q8WX39 176 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 FOXD4L4Q8WXT5 416 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 HDAC10Q969S8 669 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 FKBP10Q96AY3 582 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 LRRC46Q96FV0 321 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 SEC16BQ96JE7 1060 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 YIPF2Q9BWQ6 316 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ATG10Q9H0Y0 220 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 LRRC19Q9H756 370 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 WDR54Q9H977 334 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 NLRC4Q9NPP4 1024 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ANKRD10Q9NXR5 420 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 CRIM1Q9NZV1 1036 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 GNPTGQ9UJJ9 305 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 POMT2Q9UKY4 750 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 COLEC10Q9Y6Z7 277 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 HIVEP2P31629 2446 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 NCOA6Q14686 2063 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 MXRA5Q9NR99 2828 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 A0A0J9YYE9 177 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 C2orf74A8MZ97 194 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 EEF2KO00418 725 aaKnown RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 ADAM10O14672 748 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 TFECO14948 347 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 BMP10O95393 424 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 MT-CYBP00156 380 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 TRBC1P01850 177 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 SERPINA7P05543 415 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 PDHA1P08559 390 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 CYP11B1P15538 503 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 PRDX3P30048 256 aaKnown RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 RFC1P35251 1148 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 SOX11P35716 441 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 PEX19P40855 299 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 SPINT3P49223 89 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 STX17P56962 302 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 MCCD1P59942 119 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 OCA2Q04671 838 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 DMTNQ08495 405 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 NKG7Q16617 165 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 SWT1Q5T5J6 900 aaKnown RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 HENMT1Q5T8I9 393 aaKnown RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 TXNRD3NBQ6F5E7 133 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 BHLHB9Q6PI77 547 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 KRBA2Q6ZNG9 492 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 NDUFAF7Q7L592 441 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 STRADAQ7RTN6 431 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 OVCH1Q7RTY7 1134 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 MCATQ8IVS2 390 aaKnown RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 PPM1NQ8N819 430 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 TMEM178AQ8NBL3 297 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 LMO3Q8TAP4 145 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 FAM57AQ8TBR7 257 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 DENND1AQ8TEH3 1009 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 PIH1D2Q8WWB5 315 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 CPA5Q8WXQ8 436 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 GLYATL1Q969I3 302 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 NTAN1Q96AB6 310 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 CCDC34Q96HJ3 373 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 NSMCE3Q96MG7 304 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 YIPF4Q9BSR8 244 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 ZSCAN5AQ9BUG6 496 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 SCAND2PQ9GZW5 306 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 WWP1Q9H0M0 922 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 TP63Q9H3D4 680 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 SLC24A2Q9UI40 661 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 TMEM59LQ9UK28 342 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 PCDHA7Q9UN72 937 aa6.06□□□□□ -1.44
SDCBP-203ENST00000424270 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.06□□□□□ -1.44
SDCBP-203ENST00000424270 A0A1B0GTH9 108 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 A0A1B0GVL5 298 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 A0A1B0GX78 115 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 GTPBP10A4D1E9 387 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 BECN2A8MW95 431 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 CHUKO15111 745 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 PMM2O15305 246 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 PRMT3O60678 531 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 DNAJB6O75190 326 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 POP7O75817 140 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 ALBP02768 609 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 MSL3P1P0C860 447 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 PFKFB1P16118 471 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 CDK11BP21127 795 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 GPD1P21695 349 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 NDUFS1P28331 727 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms