RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TTC1Q99614 292 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 GALPQ9UBC7 116 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 BTRCQ9Y297 605 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 MED16Q9Y2X0 877 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 SAR1BQ9Y6B6 198 aa20.01■□□□□ 0.79
PKNOX1-202ENST00000418336 MAGEB16A2A368 324 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 TERTO14746 1132 aaKnown RBP20■□□□□ 0.79
PKNOX1-202ENST00000418336 STK17BO94768 372 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 EBLN1P0CF75 366 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 PEBP1P30086 187 aaKnown RBP20■□□□□ 0.79
PKNOX1-202ENST00000418336 IL11RAQ14626 422 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 CCDC81Q6ZN84 652 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 AMIGO1Q86WK6 493 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 LRRC6Q86X45 466 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 SPNS2Q8IVW8 549 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 TCF12Q99081 682 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 SRMSQ9H3Y6 488 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 GNPTGQ9UJJ9 305 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 ANAPC5Q9UJX4 755 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 PCDHGA4Q9Y5G9 962 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 ATRXP46100 2492 aa20■□□□□ 0.79
PKNOX1-202ENST00000418336 KALRNO60229 2985 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 LOC101059948A0A1B0GTJ6 334 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 ATXN7O15265 892 aaPredicted RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 USP1O94782 785 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 S1PR4O95977 384 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 LIFP15018 202 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 OGNP20774 298 aaKnown RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 PRDX3P30048 256 aaKnown RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 PPARGP37231 505 aaPredicted RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 CSE1LP55060 971 aaKnown RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 HSPA14Q0VDF9 509 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 DHX34Q14147 1143 aaKnown RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 MAP7Q14244 749 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 SYTL3Q4VX76 610 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 NEPROQ6NW34 567 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 UNC5AQ6ZN44 842 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 IGDCC3Q8IVU1 814 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 ZNF669Q96BR6 464 aaPredicted RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 ZNF501Q96CX3 271 aaPredicted RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 RNF31Q96EP0 1072 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 UBL7Q96S82 380 aaPredicted RBP19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 LATS2Q9NRM7 1088 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 SPHK1Q9NYA1 384 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 ASF1AQ9Y294 204 aa19.99■□□□□ 0.79
PKNOX1-202ENST00000418336 BANF1O75531 89 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 SPAG6O75602 509 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 SNRNP200O75643 2136 aaKnown RBP19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 ZBTB11O95625 1053 aaPredicted RBP19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 ST6GAL1P15907 406 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 HSD11B2P80365 405 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 FOXM1Q08050 763 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 KRT33BQ14525 404 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 PPP1R7Q15435 360 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 DNAJC21Q5F1R6 531 aaKnown RBP19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 MANEAQ5SRI9 462 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 MRNIPQ6NTE8 343 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 ZNF549Q6P9A3 640 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 HOOK3Q86VS8 718 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 DENND6AQ8IWF6 608 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 UNC5BQ8IZJ1 945 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 CACNA2D3Q8IZS8 1091 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 NLGN4XQ8N0W4 816 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 LINC01555Q8NAE3 123 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 NLGN4YQ8NFZ3 816 aaPredicted RBP19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 ASZ1Q8WWH4 475 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 OR2A14Q96R47 310 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 SLC12A9Q9BXP2 914 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 C1GALT1Q9NS00 363 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 PLAGL1Q9UM63 463 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 RPS6KL1Q9Y6S9 549 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 FAM169AQ9Y6X4 670 aa19.98■□□□□ 0.79
PKNOX1-202ENST00000418336 CTAGE9A4FU28 777 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 SLC9B1P1A6NJY1 282 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 MATN2O00339 956 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 NIPSNAP2O75323 286 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 NDUFS3O75489 264 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 PKLRP30613 574 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 FMO4P31512 558 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 GABRA4P48169 554 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 EIF3BP55884 814 aaKnown RBP19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 DHX9Q08211 1270 aaKnown RBP19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 ZIC1Q15915 447 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 KYNUQ16719 465 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 IZUMO3Q5VZ72 239 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 PTRHD1Q6GMV3 140 aaKnown RBP19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 PWWP2BQ6NUJ5 590 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 HIBCHQ6NVY1 386 aaPredicted RBP19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 CASC4Q6P4E1 433 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 ZNF449Q6P9G9 518 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 KLHL7Q8IXQ5 586 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 SIDT2Q8NBJ9 832 aaKnown RBP19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 GIMAP7Q8NHV1 300 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 PWWP2AQ96N64 755 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 TRAPPC9Q96Q05 1148 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 SLC30A3Q99726 388 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 TRIM51Q9BSJ1 452 aa19.97■□□□□ 0.79
PKNOX1-202ENST00000418336 TRIT1Q9H3H1 467 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms