RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 POLG2Q9UHN1 485 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 LGALS13Q9UHV8 139 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 RNF112Q9ULX5 631 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 RUVBL2Q9Y230 463 aaKnown RBP8.27□□□□□ -1.09
TRIM48-201ENST00000417545 BOLA1Q9Y3E2 137 aa8.27□□□□□ -1.09
TRIM48-201ENST00000417545 CPED1A4D0V7 1026 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 ZNF839A8K0R7 811 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 SUPT3HB4E1H0 165 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 SIGLEC6O43699 453 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 SMIM24O75264 130 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 SUPT3HO75486 399 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 SLCO2B1O94956 709 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 LDOC1O95751 146 aaPredicted RBP8.26□□□□□ -1.09
TRIM48-201ENST00000417545 ALDOAP04075 364 aaKnown RBP8.26□□□□□ -1.09
TRIM48-201ENST00000417545 SLC35E2BP0CK96 405 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 COL6A2P12110 1019 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 KRT4P19013 534 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 TFEBP19484 476 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 SLC26A3P40879 764 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 GLRBP48167 497 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 PGGT1BP53609 377 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 IRF9Q00978 393 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 CLCA4Q14CN2 919 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 ZKSCAN8Q15776 578 aaPredicted RBP8.26□□□□□ -1.09
TRIM48-201ENST00000417545 CCDC157Q569K6 752 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 PPM1JQ5JR12 505 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 STPG1Q5TH74 334 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 IYDQ6PHW0 289 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 ABRAXAS1Q6UWZ7 409 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 WASH2PQ6VEQ5 465 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 VRK3Q8IV63 474 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 RBM12BQ8IXT5 1001 aaKnown RBP8.26□□□□□ -1.09
TRIM48-201ENST00000417545 TBC1D21Q8IYX1 336 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 IQCKQ8N0W5 287 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 C4orf33Q8N1A6 199 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 SLC25A45Q8N413 288 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 PHC3Q8NDX5 983 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 OR5AR1Q8NGP9 310 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 PATE1Q8WXA2 126 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 NAT6Q93015 286 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 RAD51AP1Q96B01 352 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 APOLD1Q96LR9 279 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 INSM2Q96T92 566 aaPredicted RBP8.26□□□□□ -1.09
TRIM48-201ENST00000417545 MCMBPQ9BTE3 642 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 RAB11FIP5Q9BXF6 653 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 DERL2Q9GZP9 239 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 KCNK9Q9NPC2 374 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 WASH6PQ9NQA3 447 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 CPNE7Q9UBL6 633 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 LNPEPQ9UIQ6 1025 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 PCOLCE2Q9UKZ9 415 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 PADI4Q9UM07 663 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 WDR37Q9Y2I8 494 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 NFS1Q9Y697 457 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 CACNA1EQ15878 2313 aa8.26□□□□□ -1.09
TRIM48-201ENST00000417545 CUL9Q8IWT3 2517 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 A0A1W2PPM1 405 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 SYCE1LA8MT33 242 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 SLC16A5O15375 505 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 GDF9O60383 454 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 KLHL2O95198 593 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 GSTA1P08263 222 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ENO2P09104 434 aaPredicted RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 RBP1P09455 135 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 GFAPP14136 432 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 AMD1P17707 334 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 XRCC1P18887 633 aaPredicted RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 TAC1P20366 129 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 PRKAA1Q13131 559 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 PRKG2Q13237 762 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 CAPRIN2Q6IMN6 1127 aaKnown RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 KLHL35Q6PF15 583 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 TIFABQ6ZNK6 161 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 EFL1Q7Z2Z2 1120 aaKnown RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 RAB44Q7Z6P3 723 aaPredicted RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 TRABD2AQ86V40 505 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 LCA5Q86VQ0 697 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 GPSM1Q86YR5 675 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 SLC35F3Q8IY50 421 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 NAGSQ8N159 534 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 SFRP1Q8N474 314 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ARL14Q8N4G2 192 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 SPATA6LQ8N4H0 392 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 OR5K2Q8NHB8 316 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 STAG3L4Q8TBR4 150 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 NETO1Q8TDF5 533 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ANKRD49Q8WVL7 239 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 LCN9Q8WX39 176 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 SREK1Q8WXA9 508 aaKnown RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ANKRD7Q92527 254 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ALKBH8Q96BT7 664 aaKnown RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 NXNL1Q96CM4 212 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 FAM122AQ96E09 287 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 CDC6Q99741 560 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 SELENOSQ9BQE4 189 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ALG9Q9H6U8 611 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ABCF3Q9NUQ8 709 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ARL15Q9NXU5 204 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 KCNK4Q9NYG8 393 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 UTP6Q9NYH9 597 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms