RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 C2orf68Q2NKX9 166 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CDONQ4KMG0 1287 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ATP13A5Q4VNC0 1218 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GLRA4Q5JXX5 417 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TSTD2Q5T7W7 516 aa2.53□□□□□ -2
MCF2-204ENST00000414978 KIAA1161Q6NSJ0 714 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CHST3Q7LGC8 479 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ZNF276Q8N554 614 aa2.53□□□□□ -2
MCF2-204ENST00000414978 DRAXINQ8NBI3 349 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 TRPV1Q8NER1 839 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ANKRD20A12PQ8NF67 263 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GPT2Q8TD30 523 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GIMAP5Q96F15 307 aa2.53□□□□□ -2
MCF2-204ENST00000414978 NECTIN4Q96NY8 510 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TNMDQ9H2S6 317 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PDZD7Q9H5P4 517 aa2.53□□□□□ -2
MCF2-204ENST00000414978 LMAN1LQ9HAT1 526 aa2.53□□□□□ -2
MCF2-204ENST00000414978 IARS2Q9NSE4 1012 aaKnown RBP2.53□□□□□ -2
MCF2-204ENST00000414978 ABCB8Q9NUT2 735 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PTTG2Q9NZH5 202 aa2.53□□□□□ -2
MCF2-204ENST00000414978 TMOD2Q9NZR1 351 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ACTR3BQ9P1U1 418 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ARPP21Q9UBL0 812 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 ZFR2Q9UPR6 939 aaKnown RBP2.53□□□□□ -2
MCF2-204ENST00000414978 EXOC6BQ9Y2D4 811 aa2.53□□□□□ -2
MCF2-204ENST00000414978 STRAPQ9Y3F4 350 aaKnown RBP2.53□□□□□ -2
MCF2-204ENST00000414978 ATP8B3O60423 1300 aa2.53□□□□□ -2
MCF2-204ENST00000414978 MED19A0JLT2 244 aaPredicted RBP2.53□□□□□ -2
MCF2-204ENST00000414978 SLC22A23A1A5C7 686 aa2.53□□□□□ -2
MCF2-204ENST00000414978 C5orf52A6NGY3 159 aa2.53□□□□□ -2
MCF2-204ENST00000414978 SLC9B1P1A6NJY1 282 aa2.53□□□□□ -2
MCF2-204ENST00000414978 LAMTOR5O43504 91 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PEX1O43933 1283 aa2.53□□□□□ -2
MCF2-204ENST00000414978 NEMFO60524 1076 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CNMDO75829 334 aa2.53□□□□□ -2
MCF2-204ENST00000414978 NPSP0C0P6 89 aa2.53□□□□□ -2
MCF2-204ENST00000414978 RFPL3SP0C7P2 107 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PFKFB1P16118 471 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PNLIPRP2P54317 469 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ZXDAP98168 799 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GAD2Q05329 585 aa2.53□□□□□ -2
MCF2-204ENST00000414978 LARS2Q15031 903 aaKnown RBP2.53□□□□□ -2
MCF2-204ENST00000414978 DPY19L2P1Q6NXN4 242 aa2.53□□□□□ -2
MCF2-204ENST00000414978 B3GNT6Q6ZMB0 384 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CYB5R4Q7L1T6 521 aa2.53□□□□□ -2
MCF2-204ENST00000414978 DOK3Q7L591 496 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CNGA4Q8IV77 575 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PNPLA1Q8N8W4 532 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CAGE1Q8TC20 777 aa2.53□□□□□ -2
MCF2-204ENST00000414978 HEXDCQ8WVB3 486 aa2.53□□□□□ -2
MCF2-204ENST00000414978 FAM46BQ96A09 425 aa2.53□□□□□ -2
MCF2-204ENST00000414978 KAZALD1Q96I82 304 aa2.53□□□□□ -2
MCF2-204ENST00000414978 OR2A14Q96R47 310 aa2.53□□□□□ -2
MCF2-204ENST00000414978 OSBPL8Q9BZF1 889 aa2.53□□□□□ -2
MCF2-204ENST00000414978 SPRY4Q9C004 299 aa2.53□□□□□ -2
MCF2-204ENST00000414978 C1orf21Q9H246 121 aa2.53□□□□□ -2
MCF2-204ENST00000414978 OSGEPL1Q9H4B0 414 aa2.53□□□□□ -2
MCF2-204ENST00000414978 GALNT9Q9HCQ5 603 aa2.53□□□□□ -2
MCF2-204ENST00000414978 PPP1R14DQ9NXH3 145 aa2.53□□□□□ -2
MCF2-204ENST00000414978 KCNE5Q9UJ90 142 aa2.53□□□□□ -2
MCF2-204ENST00000414978 ZNF148Q9UQR1 794 aa2.53□□□□□ -2
MCF2-204ENST00000414978 RNF115Q9Y4L5 304 aa2.53□□□□□ -2
MCF2-204ENST00000414978 CLCA3PQ9Y6N3 262 aa2.53□□□□□ -2
MCF2-204ENST00000414978 COL4A2P08572 1712 aa2.53□□□□□ -2.01
MCF2-204ENST00000414978 SPTBN5Q9NRC6 3674 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 PTPRCP08575 1304 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 A0A1B0GVM2 712 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 EIF3DO15371 548 aaKnown RBP eCLIP2.52□□□□□ -2.01
MCF2-204ENST00000414978 SLC16A3O15427 465 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 CACNG3O60359 315 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TTLL1O95922 423 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 BMP7P18075 431 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ACHEP22303 614 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 KCNA5P22460 613 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 KELP23276 732 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 GLDCP23378 1020 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ITGB7P26010 798 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CHMLP26374 656 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 GJC1P36383 396 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CAMLGP49069 296 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 VAV2P52735 878 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TPD52P55327 224 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 ACY1Q03154 408 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 SIGLEC14Q08ET2 396 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 HLXQ14774 488 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 PFKFB3Q16875 520 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 ZXDCQ2QGD7 858 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 CENPPQ6IPU0 288 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CLEC2AQ6UVW9 174 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CCDC73Q6ZRK6 1079 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 LPCAT2Q7L5N7 544 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 DZIP1Q86YF9 867 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 HACE1Q8IYU2 909 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TMEM151AQ8N4L1 468 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 MINDY1Q8N5J2 469 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 C12orf76Q8N812 135 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 CCNYQ8ND76 341 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 RFKQ969G6 155 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 FAM162AQ96A26 154 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 EME1Q96AY2 570 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms