RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TUBB6Q9BUF5 446 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 CADM1Q9BY67 442 aaKnown RBP15.2■□□□□ 0.02
SHMT2-202ENST00000414700 STX18Q9P2W9 335 aaKnown RBP15.2■□□□□ 0.02
SHMT2-202ENST00000414700 TMCO1Q9UM00 188 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 DMTF1Q9Y222 760 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 PLEKHM1Q9Y4G2 1056 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 ST14Q9Y5Y6 855 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 HS3ST3A1Q9Y663 406 aa15.2■□□□□ 0.02
SHMT2-202ENST00000414700 G3V2L1 256 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 QSOX1O00391 747 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 BTN3A1O00481 513 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 GRID2O43424 1007 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 CCDC22O60826 627 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 COQ9O75208 318 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 GPC4O75487 556 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 NFATC4Q14934 902 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 ACAP2Q15057 778 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 CCDC153Q494R4 210 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 ENPP7Q6UWV6 458 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 FAM83HQ6ZRV2 1179 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 CHST15Q7LFX5 561 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 LRRTM4Q86VH4 590 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 CFAP206Q8IYR0 622 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 DTWD2Q8NBA8 298 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 OR1E3Q8WZA6 343 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 DLG3Q92796 817 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 TSACCQ96A04 125 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 MOCOSQ96EN8 888 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 ZNF514Q96K75 400 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 ZNF184Q99676 751 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 ACSS2Q9NR19 701 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 COPG2Q9UBF2 871 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 ADAMTS6Q9UKP5 1117 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 ARHGEF17Q96PE2 2063 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 PI4KAP42356 2102 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 SLC5A10A0PJK1 596 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 PRSS38A1L453 326 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 DGKAP23743 735 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 KIAA1024LP59773 190 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 KLC3Q6P597 504 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 RD3Q7Z3Z2 195 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 CLNKQ7Z7G1 428 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 OR56A4Q8NGH8 313 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 ASZ1Q8WWH4 475 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 STMN2Q93045 179 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 EXT2Q93063 718 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 LINC00615Q96LM1 132 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 MRPL57Q9BQC6 102 aaKnown RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 BTBD10Q9BSF8 475 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 TSSK1BQ9BXA7 367 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 MIR1-1HGQ9H1L0 117 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 MRPL46Q9H2W6 279 aaKnown RBP15.19■□□□□ 0.02
SHMT2-202ENST00000414700 CYP4F12Q9HCS2 524 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 SLCO1B3Q9NPD5 702 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 AASDHPPTQ9NRN7 309 aa15.19■□□□□ 0.02
SHMT2-202ENST00000414700 FANCMQ8IYD8 2048 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 CCDC163A0A0D9SF12 145 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 KRT87PA6NCN2 255 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 FAM86C2PA6NEL3 165 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 MEI4A8MW99 385 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 SLCO2B1O94956 709 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 WNT1P04628 370 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 APOA4P06727 396 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 HOXC4P09017 264 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-202ENST00000414700 ACP5P13686 325 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 CD27P26842 260 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 THOP1P52888 689 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 ARHGAP8P85298 464 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 TTLL9Q3SXZ7 439 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 PYCR3Q53H96 274 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 CES4AQ5XG92 561 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 C10orf107Q8IVU9 208 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 FBXL6Q8N531 539 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 OR2L2Q8NH16 312 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 SKA2Q8WVK7 121 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-202ENST00000414700 KIAA1191Q96A73 305 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 PDLIM5Q96HC4 596 aaKnown RBP15.18■□□□□ 0.02
SHMT2-202ENST00000414700 ATOH8Q96SQ7 321 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 CENPKQ9BS16 269 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 COG4Q9H9E3 785 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 COMMD3-BMI1R4GMX3 469 aa15.18■□□□□ 0.02
SHMT2-202ENST00000414700 CUL9Q8IWT3 2517 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 MGAT4DA6NG13 374 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 BPGMP07738 259 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 LYNP07948 512 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 THEGLP0DJG4 465 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 MTHFD2P13995 350 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 GNPDA1P46926 289 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 RABIFP47224 123 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 RGS4P49798 205 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 SYTL3Q4VX76 610 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 PLEKHS1Q5SXH7 462 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 SBSNQ6UWP8 590 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 SLC36A4Q6YBV0 504 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 ZCCHC23Q6ZST2 131 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 WDR5BQ86VZ2 330 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 AMZ2Q86W34 360 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 C1orf216Q8TAB5 229 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 TMEM159Q96B96 161 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 WDR92Q96MX6 357 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms